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Protein

Ammonium transporter

Gene

SAR11_0050

Organism
Pelagibacter ubique (strain HTCC1062)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Ammonia transportUniRule annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Ammonium transporterUniRule annotation
Gene namesi
Ordered Locus Names:SAR11_0050Imported
OrganismiPelagibacter ubique (strain HTCC1062)Imported
Taxonomic identifieri335992 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaPelagibacteralesPelagibacteraceaeCandidatus Pelagibacter
Proteomesi
  • UP000002528 Componenti: Chromosome

Subcellular locationi

  • Membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei46 – 65HelicalUniRule annotationAdd BLAST20
Transmembranei86 – 104HelicalUniRule annotationAdd BLAST19
Transmembranei124 – 146HelicalUniRule annotationAdd BLAST23
Transmembranei153 – 177HelicalUniRule annotationAdd BLAST25
Transmembranei197 – 218HelicalUniRule annotationAdd BLAST22
Transmembranei239 – 256HelicalUniRule annotationAdd BLAST18
Transmembranei268 – 293HelicalUniRule annotationAdd BLAST26
Transmembranei300 – 319HelicalUniRule annotationAdd BLAST20
Transmembranei325 – 343HelicalUniRule annotationAdd BLAST19
Transmembranei355 – 375HelicalUniRule annotationAdd BLAST21
Transmembranei387 – 410HelicalUniRule annotationAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi335992.SAR11_0050.

Structurei

3D structure databases

ProteinModelPortaliQ4FPP5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini517 – 745PPM-type phosphataseInterPro annotationAdd BLAST229

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili3 – 30Sequence analysisAdd BLAST28
Coiled coili476 – 503Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the ammonia transporter channel (TC 1.A.11.2) family. [View classification]UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
COG0004. LUCA.
COG2208. LUCA.
HOGENOMiHOG000134455.
OMAiISEHNAS.
OrthoDBiPOG091H057V.

Family and domain databases

Gene3Di1.10.3430.10. 1 hit.
InterProiIPR029020. Ammonium/urea_transptr.
IPR001905. Ammonium_transpt.
IPR024041. NH4_transpt_AmtB-like_dom.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR11730. PTHR11730. 1 hit.
PfamiPF00909. Ammonium_transp. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF111352. SSF111352. 1 hit.
TIGRFAMsiTIGR00836. amt. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4FPP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAADTQILL NKLQSNINQL ELTNKGALNA LEFRLDAILQ ANLDTFWLLI
60 70 80 90 100
CAILVFLMQA GFMCLETGLS RNKNSINVAL KNVSDFGISV VVFWAFGFAL
110 120 130 140 150
MYGTSVSGLF GTKFFFFTTK VAGYQTYFVF QAMFVATAAT IISGAVAERL
160 170 180 190 200
KFFSYIIITL LVSGLFYPIV GHWSWAFNFE NPAEKFGWLG QLGYLDFAGA
210 220 230 240 250
SVVHSVGGWI ALSVLLVVGN RTGRFREDDK KKSFQGSNTP MAALGALILW
260 270 280 290 300
FGWFGFNGGA NGAMDLKIPL ILINTFLSAS FGLIFSSVMG IIVLKKPEPL
310 320 330 340 350
FMITGPLAGL VSITASCAYV DPTHAIIIGS IGGIISGSTI VLLEKIKIDD
360 370 380 390 400
VVSAIPVHLA CGIWGTIAVA LFANFELMGV EKTRLEQIYI QLIGISSIGA
410 420 430 440 450
FCFIGSYLIL KTINSFFPLR VSKIHEELGL NISEHNASTD THELLEVLTN
460 470 480 490 500
QAKSDNYSSR APQDPFTESG IIGTQYNVIM NKLEQSEKQK NKWKNRVSKE
510 520 530 540 550
IKLAMNVQQR LMPKRDIENY PIFGLNIPAR EISGDFYDFY LHDDEVYFTL
560 570 580 590 600
SDVSGKGVNA GMVMAKAITL FKIFAKQKFK PNEILLEMNN DLKETNPVGT
610 620 630 640 650
FITSIVGRYN LKTDLVEIAN AGHQPTLLKV GKDFKEYPSS SMPLAVIKHK
660 670 680 690 700
DESVYQLESF KLNGGRIYCF TDGFSECMDE NKQEIGIDGV KELILKHTNS
710 720 730 740
SLQKELTSAT EEIRLKSLKK EIVEDGVKKD NDILDDDLTI IAIGK
Length:745
Mass (Da):82,369
Last modified:August 30, 2005 - v1
Checksum:i1F4F1D0CD76601D4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000084 Genomic DNA. Translation: AAZ20875.1.
RefSeqiWP_011281441.1. NC_007205.1.

Genome annotation databases

EnsemblBacteriaiAAZ20875; AAZ20875; SAR11_0050.
KEGGipub:SAR11_0050.
PATRICi31989559. VBICanPel5618_0051.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000084 Genomic DNA. Translation: AAZ20875.1.
RefSeqiWP_011281441.1. NC_007205.1.

3D structure databases

ProteinModelPortaliQ4FPP5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi335992.SAR11_0050.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ20875; AAZ20875; SAR11_0050.
KEGGipub:SAR11_0050.
PATRICi31989559. VBICanPel5618_0051.

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
COG0004. LUCA.
COG2208. LUCA.
HOGENOMiHOG000134455.
OMAiISEHNAS.
OrthoDBiPOG091H057V.

Family and domain databases

Gene3Di1.10.3430.10. 1 hit.
InterProiIPR029020. Ammonium/urea_transptr.
IPR001905. Ammonium_transpt.
IPR024041. NH4_transpt_AmtB-like_dom.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR11730. PTHR11730. 1 hit.
PfamiPF00909. Ammonium_transp. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF111352. SSF111352. 1 hit.
TIGRFAMsiTIGR00836. amt. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ4FPP5_PELUB
AccessioniPrimary (citable) accession number: Q4FPP5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 30, 2005
Last sequence update: August 30, 2005
Last modified: November 2, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.