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Q4FPK0

- Q4FPK0_PELUB

UniProt

Q4FPK0 - Q4FPK0_PELUB

Protein
Submitted name:

Sigma factor sigB regulation protein

Gene

rsbU

Organism
Pelagibacter ubique (strain HTCC1062)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (30 Aug 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro

    Enzyme and pathway databases

    BioCyciCPEL335992:GH3Z-66-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Sigma factor sigB regulation proteinImported
    Gene namesi
    Name:rsbUImported
    Ordered Locus Names:SAR11_0064Imported
    OrganismiPelagibacter ubique (strain HTCC1062)Imported
    Taxonomic identifieri335992 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSAR11 clusterCandidatus Pelagibacter
    ProteomesiUP000002528: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi335992.SAR11_0064.

    Structurei

    3D structure databases

    ProteinModelPortaliQ4FPK0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    OMAiNTNQNTI.
    OrthoDBiEOG6RZB69.

    Family and domain databases

    Gene3Di3.30.450.40. 1 hit.
    InterProiIPR003018. GAF.
    IPR029016. GAF_dom_like.
    IPR001932. PP2C-like_dom.
    [Graphical view]
    PfamiPF13492. GAF_3. 1 hit.
    PF07228. SpoIIE. 1 hit.
    [Graphical view]
    SMARTiSM00065. GAF. 1 hit.
    SM00331. PP2C_SIG. 1 hit.
    [Graphical view]
    SUPFAMiSSF55781. SSF55781. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q4FPK0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNNEFHQSQN YQKFNEYQFI NNMFFGAKKT ETIKVDNTSV KDLELVTKMS    50
    QEFAKTLDLK ETLQTSLELI IKRINAQAAN IFLIDNDKQN FQCIASKHQA 100
    YLEDFEIPIT QGVMGKAALM KQCIRVGDVR KDVREIAEFY FDLDNKTNFT 150
    TYSVLCSPLI VSDECIGVIH CLNKKTDNKL FEESDRKLLE TLSGPAALAI 200
    RNAKMAKDLI VKNRIEKEIE IVGEIQKTLL SQNIKENFPI AGINIPAKVV 250
    SGDFYNFSEL SNGVYGFGVA DVSGKGIKSS LLMSKASSLY RCLSKTNFSA 300
    AGLLDILNTE ICETTSRGMF VTMLVGIYDS NKKELTLSNA GHEPPLIYSK 350
    DGNFSNFEEA GPPLGIAPKF KFKETKINFS NSSMYIFTDG ITEIRDAKGN 400
    MLEAEGFKDY IKKYQQIPNH ERLNKIIEDI IKSGRIQKDD LTIVTVDG 448
    Length:448
    Mass (Da):50,402
    Last modified:August 30, 2005 - v1
    Checksum:iF4EE21315492FDED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000084 Genomic DNA. Translation: AAZ20889.1.
    RefSeqiYP_265492.1. NC_007205.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ20889; AAZ20889; SAR11_0064.
    GeneIDi3516600.
    KEGGipub:SAR11_0064.
    PATRICi31989587. VBICanPel5618_0065.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000084 Genomic DNA. Translation: AAZ20889.1 .
    RefSeqi YP_265492.1. NC_007205.1.

    3D structure databases

    ProteinModelPortali Q4FPK0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 335992.SAR11_0064.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ20889 ; AAZ20889 ; SAR11_0064 .
    GeneIDi 3516600.
    KEGGi pub:SAR11_0064.
    PATRICi 31989587. VBICanPel5618_0065.

    Phylogenomic databases

    OMAi NTNQNTI.
    OrthoDBi EOG6RZB69.

    Enzyme and pathway databases

    BioCyci CPEL335992:GH3Z-66-MONOMER.

    Family and domain databases

    Gene3Di 3.30.450.40. 1 hit.
    InterProi IPR003018. GAF.
    IPR029016. GAF_dom_like.
    IPR001932. PP2C-like_dom.
    [Graphical view ]
    Pfami PF13492. GAF_3. 1 hit.
    PF07228. SpoIIE. 1 hit.
    [Graphical view ]
    SMARTi SM00065. GAF. 1 hit.
    SM00331. PP2C_SIG. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55781. SSF55781. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HTCC1062Imported.

    Entry informationi

    Entry nameiQ4FPK0_PELUB
    AccessioniPrimary (citable) accession number: Q4FPK0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 30, 2005
    Last sequence update: August 30, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3