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Protein
Submitted name:

Sigma factor sigB regulation protein

Gene

rsbU

Organism
Pelagibacter ubique (strain HTCC1062)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciCPEL335992:GH3Z-66-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor sigB regulation proteinImported
Gene namesi
Name:rsbUImported
Ordered Locus Names:SAR11_0064Imported
OrganismiPelagibacter ubique (strain HTCC1062)Imported
Taxonomic identifieri335992 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSAR11 clusterCandidatus Pelagibacter
ProteomesiUP000002528 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi335992.SAR11_0064.

Structurei

3D structure databases

ProteinModelPortaliQ4FPK0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiNTNQNTI.
OrthoDBiEOG6RZB69.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4FPK0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNEFHQSQN YQKFNEYQFI NNMFFGAKKT ETIKVDNTSV KDLELVTKMS
60 70 80 90 100
QEFAKTLDLK ETLQTSLELI IKRINAQAAN IFLIDNDKQN FQCIASKHQA
110 120 130 140 150
YLEDFEIPIT QGVMGKAALM KQCIRVGDVR KDVREIAEFY FDLDNKTNFT
160 170 180 190 200
TYSVLCSPLI VSDECIGVIH CLNKKTDNKL FEESDRKLLE TLSGPAALAI
210 220 230 240 250
RNAKMAKDLI VKNRIEKEIE IVGEIQKTLL SQNIKENFPI AGINIPAKVV
260 270 280 290 300
SGDFYNFSEL SNGVYGFGVA DVSGKGIKSS LLMSKASSLY RCLSKTNFSA
310 320 330 340 350
AGLLDILNTE ICETTSRGMF VTMLVGIYDS NKKELTLSNA GHEPPLIYSK
360 370 380 390 400
DGNFSNFEEA GPPLGIAPKF KFKETKINFS NSSMYIFTDG ITEIRDAKGN
410 420 430 440
MLEAEGFKDY IKKYQQIPNH ERLNKIIEDI IKSGRIQKDD LTIVTVDG
Length:448
Mass (Da):50,402
Last modified:August 30, 2005 - v1
Checksum:iF4EE21315492FDED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000084 Genomic DNA. Translation: AAZ20889.1.
RefSeqiWP_011281448.1. NC_007205.1.
YP_265492.1. NC_007205.1.

Genome annotation databases

EnsemblBacteriaiAAZ20889; AAZ20889; SAR11_0064.
KEGGipub:SAR11_0064.
PATRICi31989587. VBICanPel5618_0065.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000084 Genomic DNA. Translation: AAZ20889.1.
RefSeqiWP_011281448.1. NC_007205.1.
YP_265492.1. NC_007205.1.

3D structure databases

ProteinModelPortaliQ4FPK0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi335992.SAR11_0064.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ20889; AAZ20889; SAR11_0064.
KEGGipub:SAR11_0064.
PATRICi31989587. VBICanPel5618_0065.

Phylogenomic databases

OMAiNTNQNTI.
OrthoDBiEOG6RZB69.

Enzyme and pathway databases

BioCyciCPEL335992:GH3Z-66-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HTCC1062Imported.

Entry informationi

Entry nameiQ4FPK0_PELUB
AccessioniPrimary (citable) accession number: Q4FPK0
Entry historyi
Integrated into UniProtKB/TrEMBL: August 30, 2005
Last sequence update: August 30, 2005
Last modified: June 24, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.