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Q4FPK0

- Q4FPK0_PELUB

UniProt

Q4FPK0 - Q4FPK0_PELUB

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Protein
Submitted name:

Sigma factor sigB regulation protein

Gene

rsbU

Organism
Pelagibacter ubique (strain HTCC1062)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCPEL335992:GH3Z-66-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor sigB regulation proteinImported
Gene namesi
Name:rsbUImported
Ordered Locus Names:SAR11_0064Imported
OrganismiPelagibacter ubique (strain HTCC1062)Imported
Taxonomic identifieri335992 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSAR11 clusterCandidatus Pelagibacter
ProteomesiUP000002528: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi335992.SAR11_0064.

Structurei

3D structure databases

ProteinModelPortaliQ4FPK0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiNTNQNTI.
OrthoDBiEOG6RZB69.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4FPK0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNNEFHQSQN YQKFNEYQFI NNMFFGAKKT ETIKVDNTSV KDLELVTKMS
60 70 80 90 100
QEFAKTLDLK ETLQTSLELI IKRINAQAAN IFLIDNDKQN FQCIASKHQA
110 120 130 140 150
YLEDFEIPIT QGVMGKAALM KQCIRVGDVR KDVREIAEFY FDLDNKTNFT
160 170 180 190 200
TYSVLCSPLI VSDECIGVIH CLNKKTDNKL FEESDRKLLE TLSGPAALAI
210 220 230 240 250
RNAKMAKDLI VKNRIEKEIE IVGEIQKTLL SQNIKENFPI AGINIPAKVV
260 270 280 290 300
SGDFYNFSEL SNGVYGFGVA DVSGKGIKSS LLMSKASSLY RCLSKTNFSA
310 320 330 340 350
AGLLDILNTE ICETTSRGMF VTMLVGIYDS NKKELTLSNA GHEPPLIYSK
360 370 380 390 400
DGNFSNFEEA GPPLGIAPKF KFKETKINFS NSSMYIFTDG ITEIRDAKGN
410 420 430 440
MLEAEGFKDY IKKYQQIPNH ERLNKIIEDI IKSGRIQKDD LTIVTVDG
Length:448
Mass (Da):50,402
Last modified:August 30, 2005 - v1
Checksum:iF4EE21315492FDED
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000084 Genomic DNA. Translation: AAZ20889.1.
RefSeqiYP_265492.1. NC_007205.1.

Genome annotation databases

EnsemblBacteriaiAAZ20889; AAZ20889; SAR11_0064.
GeneIDi3516600.
KEGGipub:SAR11_0064.
PATRICi31989587. VBICanPel5618_0065.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000084 Genomic DNA. Translation: AAZ20889.1 .
RefSeqi YP_265492.1. NC_007205.1.

3D structure databases

ProteinModelPortali Q4FPK0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 335992.SAR11_0064.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ20889 ; AAZ20889 ; SAR11_0064 .
GeneIDi 3516600.
KEGGi pub:SAR11_0064.
PATRICi 31989587. VBICanPel5618_0065.

Phylogenomic databases

OMAi NTNQNTI.
OrthoDBi EOG6RZB69.

Enzyme and pathway databases

BioCyci CPEL335992:GH3Z-66-MONOMER.

Family and domain databases

Gene3Di 3.30.450.40. 1 hit.
InterProi IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view ]
Pfami PF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view ]
SMARTi SM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view ]
SUPFAMi SSF55781. SSF55781. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HTCC1062Imported.

Entry informationi

Entry nameiQ4FPK0_PELUB
AccessioniPrimary (citable) accession number: Q4FPK0
Entry historyi
Integrated into UniProtKB/TrEMBL: August 30, 2005
Last sequence update: August 30, 2005
Last modified: October 1, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3