Q4FP82 (Q4FP82_PELUB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-3-methyladenine glycosylase I EMBL AAZ21007.1
EC=3.2.2.20 EMBL AAZ21007.1

Gene names

Name:	tag EMBL AAZ21007.1
Ordered Locus Names:	SAR11_0186

Organism

Pelagibacter ubique (strain HTCC1062) [Complete proteome] [HAMAP] EMBL AAZ21007.1

Taxonomic identifier

335992 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › SAR11 cluster › Candidatus Pelagibacter

Protein attributes

Sequence length	190 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL AAZ21007.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular function	DNA-3-methyladenine glycosylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q4FP82 [UniParc]. Last modified August 30, 2005. Version 1. Checksum: 9B2E459B8C5DC62D	FASTA	190	21,781
	10 20 30 40 50 60 MSSLINKYKS PSEAVLTSRK DIFFSLCKSI IGQQISVAAA NSVFLKFKKK CKNKINAKTV 70 80 90 100 110 120 SKLSSVQLKS CGLSGQKVRG IKSLAKQILD KSFNPRLIPK MSDEEAIIYL SQLRQIGRWS 130 140 150 160 170 180 AEMILLFTYN RSNIWPIQDI GLLRGISKNY KKKYLPPESY VKLLNKRFSP YCSVATWYLW 190 RSIDPEPIQY

References

[1]

"Genome streamlining in a cosmopolitan oceanic bacterium." Giovannoni S.J., Tripp H.J., Givan S., Podar M., Vergin K.L., Baptista D., Bibbs L., Eads J., Richardson T.H., Noordewier M., Rappe M.S., Short J.M., Carrington J.C., Mathur E.J. Science 309:1242-1245(2005) [PubMed: 16109880] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HTCC1062.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000084 Genomic DNA. Translation: AAZ21007.1.
RefSeq	YP_265610.1. NC_007205.1.
3D structure databases
ProteinModelPortal	Q4FP82.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3516931.
GenomeReviews	Gene locus SAR11_0186 in contig CP000084_GR.
KEGG	pub:SAR11_0186.
PATRIC	31989829. VBICanPel5618_0185.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0122.
HOGENOM	HBG544181.
OMA	LYLWEIS.
PhylomeDB	Q4FP82.
Family and domain databases
InterPro	IPR011257. DNA_glycosylase. IPR003265. HhH-GPD_domain. IPR023170. HTH_base_excis_C. [Graphical view]
Gene3D	G3DSA:1.10.340.30. DNA_glycosylase. 1 hit. G3DSA:1.10.1670.10. HTH_base_excis_C. 1 hit.
KO	K01247.
Pfam	PF00730. HhH-GPD. 1 hit. [Graphical view]
SMART	SM00478. ENDO3c. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q4FP82_PELUB

Accession

Primary (citable) accession number: Q4FP82

Entry history

Integrated into UniProtKB/TrEMBL:	August 30, 2005
Last sequence update:	August 30, 2005
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)