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Q4FNR8 (Q4FNR8_PELUB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SAR11_0349
OrganismPelagibacter ubique (strain HTCC1062) [Complete proteome] [HAMAP] EMBL AAZ21171.1
Taxonomic identifier335992 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesSAR11 clusterCandidatus Pelagibacter

Protein attributes

Sequence length557 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL AAZ21171.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q4FNR8 [UniParc].

Last modified August 30, 2005. Version 1.
Checksum: 5A45E66D30BB1812

FASTA55764,943
        10         20         30         40         50         60 
MSIKPENINL NKIFIKYLNE KQYSKLQLHY EKLGKTEKQL PAIIFYYACA ITLNPSSNIK 

        70         80         90        100        110        120 
NLKHAHNLFE MLYVNNRHDL QLLCNMIELS FRTQEFKVVL PYVEEAYKIN QSDERLLLGL 

       130        140        150        160        170        180 
SKIHLYLANL KESIKYYKIL FKINPKSKIN RDEFLTSLNY ASGITQEYYL SECKNYLKLL 

       190        200        210        220        230        240 
ETNKDLEDYN FNFKNLKNNK IKIGFLSSDF KTHPVSFFLK GLLLNFNKDK FEISLISNLH 

       250        260        270        280        290        300 
KSHYDNITDE LKLLTKNWIN INSLSDSEAT NLLRSFELDI LIDLCGFFRG NRFQVISNRA 

       310        320        330        340        350        360 
AKIQACWLGY NNTTGIKNMD YLIADHNLIK KEEEKLYSEK VLFLPKIWNA MTPSNILPEI 

       370        380        390        400        410        420 
QKNNSIFTYA SFNNFHKISD DTIDVWSKIL NNSNSQIILK NPMPSSIVGE ELKLNLLKKF 

       430        440        450        460        470        480 
IARGVEKKKI LFINRKKDFQ DHLGLYNNVD VALDTFPYPG VTTTFDAVLM GVPVLTMKGH 

       490        500        510        520        530        540 
NLNSRCGESI NINLQMQNFI AENKDDYFNK ALSLQKEKNI LQNFGKNLRE KVLKSSLFDT 

       550 
KDFTKSFEKI IQKIISK 

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References

[1]"Genome streamlining in a cosmopolitan oceanic bacterium."
Giovannoni S.J., Tripp H.J., Givan S., Podar M., Vergin K.L., Baptista D., Bibbs L., Eads J., Richardson T.H., Noordewier M., Rappe M.S., Short J.M., Carrington J.C., Mathur E.J.
Science 309:1242-1245(2005) [PubMed: 16109880] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HTCC1062.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000084 Genomic DNA. Translation: AAZ21171.1.
RefSeqYP_265774.1. NC_007205.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT41. Glycosyltransferase Family 41.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3517679.
GenomeReviewsGene locus SAR11_0349 in contig CP000084_GR.
KEGGpub:SAR11_0349.
PATRIC31990157. VBICanPel5618_0348.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3914.
OMAVFCCFNQ.

Family and domain databases

InterProIPR013026. TPR-contain.
IPR011990. TPR-like_helical.
[Graphical view]
Gene3DG3DSA:1.25.40.10. TPR-like_helical. 1 hit.
PROSITEPS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ4FNR8_PELUB
AccessionPrimary (citable) accession number: Q4FNR8
Entry history
Integrated into UniProtKB/TrEMBL: August 30, 2005
Last sequence update: August 30, 2005
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)