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Protein
Submitted name:

Probable sigma factor SigB regulation protein

Gene

sigB

Organism
Pelagibacter ubique (strain HTCC1062)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCPEL335992:GH3Z-1234-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable sigma factor SigB regulation proteinImported
Gene namesi
Name:sigBImported
Ordered Locus Names:SAR11_1218Imported
OrganismiPelagibacter ubique (strain HTCC1062)Imported
Taxonomic identifieri335992 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSAR11 clusterCandidatus Pelagibacter
ProteomesiUP000002528 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi335992.SAR11_1218.

Family & Domainsi

Phylogenomic databases

OMAiYAMENEL.
OrthoDBiEOG69GZGV.

Family and domain databases

InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4FLB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFPKNNEENI LLAKNVPSLD VSGDFYNFKN IGDKIFFTLG DVSGKGVDAG
60 70 80 90 100
LIMARVTALF EILVEEKKSL IEIVSLINDN LYNLRSGKFL TGIFAVYDKK
110 120 130 140 150
SKNLEFINAG HSESIISENK KITEHVSSKI PPLGVQPINL DLNSVLNKIS
160 170 180 190 200
LKDKIFYIYS DGLSESKDFE GNEIEAEGII DLLNKNKDHD IATQLENIFI
210 220 230
EISAFGALQN MSNEEQSIIK DDLTILAING KNI
Length:233
Mass (Da):25,902
Last modified:August 29, 2005 - v1
Checksum:iF077ED9AC3507B0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000084 Genomic DNA. Translation: AAZ22024.1.
RefSeqiWP_011282229.1. NC_007205.1.
YP_266628.1. NC_007205.1.

Genome annotation databases

EnsemblBacteriaiAAZ22024; AAZ22024; SAR11_1218.
KEGGipub:SAR11_1218.
PATRICi31991941. VBICanPel5618_1210.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000084 Genomic DNA. Translation: AAZ22024.1.
RefSeqiWP_011282229.1. NC_007205.1.
YP_266628.1. NC_007205.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi335992.SAR11_1218.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ22024; AAZ22024; SAR11_1218.
KEGGipub:SAR11_1218.
PATRICi31991941. VBICanPel5618_1210.

Phylogenomic databases

OMAiYAMENEL.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciCPEL335992:GH3Z-1234-MONOMER.

Family and domain databases

InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HTCC1062Imported.

Entry informationi

Entry nameiQ4FLB4_PELUB
AccessioniPrimary (citable) accession number: Q4FLB4
Entry historyi
Integrated into UniProtKB/TrEMBL: August 29, 2005
Last sequence update: August 29, 2005
Last modified: March 31, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.