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Protein
Submitted name:

Efnb2 protein

Gene

Efnb2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Efnb2 proteinImported
Submitted name:
Ephrin B2, isoform CRA_aImported
Gene namesi
Name:Efnb2Imported
ORF Names:mCG_17314Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:105097. Efnb2.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei228 – 253HelicalSequence analysisAdd BLAST26

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSMUSG00000001300.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000001319.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 167Ephrin RBD (ephrin receptor-binding)InterPro annotationAdd BLAST137

Sequence similaritiesi

Belongs to the ephrin family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3858. Eukaryota.
ENOG4111FMJ. LUCA.
HOVERGENiHBG051448.
KOiK05463.
OMAiGSTRHND.
OrthoDBiEOG091G0BPC.

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR008972. Cupredoxin.
IPR031328. Ephrin.
IPR019765. Ephrin_CS.
IPR001799. Ephrin_RBD.
[Graphical view]
PANTHERiPTHR11304. PTHR11304. 1 hit.
PfamiPF00812. Ephrin. 1 hit.
[Graphical view]
PRINTSiPR01347. EPHRIN.
ProDomiPD002533. Ephrin. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF49503. SSF49503. 1 hit.
PROSITEiPS01299. EPHRIN_RBD_1. 1 hit.
PS51551. EPHRIN_RBD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4FJM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMARSRRDS VWKYCWGLLM VLCRTAISRS IVLEPIYWNS SNSKFLPGQG
60 70 80 90 100
LVLYPQIGDK LDIICPKVDS KTVGQYEYYK VYMVDKDQAD RCTIKKENTP
110 120 130 140 150
LLNCARPDQD VKFTIKFQEF SPNLWGLEFQ KNKDYYIIST SNGSLEGLDN
160 170 180 190 200
QEGGVCQTRA MKILMKVGQD ASSAGSARNH GPTRRPELEA GTNGRSSTTS
210 220 230 240 250
PFVKPNPGSS TDGNSAGHSG NNLLGSEVAL FAGIASGCII FIVIIITLVV
260 270 280 290 300
LLLKYRRRHR KHSPQHTTTL SLSTLATPKR GGNNNGSEPS DVIIPLRTAD
310 320 330
SVFCPHYEKV SGDYGHPVYI VQEMPPQSPA NIYYKV
Length:336
Mass (Da):37,202
Last modified:August 30, 2005 - v1
Checksum:iD08894996E399554
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK132845 mRNA. Translation: BAE21388.1.
AK134108 mRNA. Translation: BAE22016.1.
AK142203 mRNA. Translation: BAE24974.1.
AK142283 mRNA. Translation: BAE25008.1.
AK143059 mRNA. Translation: BAE25260.1.
CT010381 mRNA. Translation: CAJ18588.1.
CH466566 Genomic DNA. Translation: EDL22025.1.
RefSeqiNP_034241.2. NM_010111.5.
UniGeneiMm.209813.

Genome annotation databases

GeneIDi13642.
KEGGimmu:13642.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK132845 mRNA. Translation: BAE21388.1.
AK134108 mRNA. Translation: BAE22016.1.
AK142203 mRNA. Translation: BAE24974.1.
AK142283 mRNA. Translation: BAE25008.1.
AK143059 mRNA. Translation: BAE25260.1.
CT010381 mRNA. Translation: CAJ18588.1.
CH466566 Genomic DNA. Translation: EDL22025.1.
RefSeqiNP_034241.2. NM_010111.5.
UniGeneiMm.209813.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000001319.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi13642.
KEGGimmu:13642.

Organism-specific databases

CTDi1948.
MGIiMGI:105097. Efnb2.

Phylogenomic databases

eggNOGiKOG3858. Eukaryota.
ENOG4111FMJ. LUCA.
HOVERGENiHBG051448.
KOiK05463.
OMAiGSTRHND.
OrthoDBiEOG091G0BPC.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000001300.

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR008972. Cupredoxin.
IPR031328. Ephrin.
IPR019765. Ephrin_CS.
IPR001799. Ephrin_RBD.
[Graphical view]
PANTHERiPTHR11304. PTHR11304. 1 hit.
PfamiPF00812. Ephrin. 1 hit.
[Graphical view]
PRINTSiPR01347. EPHRIN.
ProDomiPD002533. Ephrin. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF49503. SSF49503. 1 hit.
PROSITEiPS01299. EPHRIN_RBD_1. 1 hit.
PS51551. EPHRIN_RBD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ4FJM3_MOUSE
AccessioniPrimary (citable) accession number: Q4FJM3
Entry historyi
Integrated into UniProtKB/TrEMBL: August 30, 2005
Last sequence update: August 30, 2005
Last modified: November 30, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.