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Q4DMH8

- Q4DMH8_TRYCC

UniProt

Q4DMH8 - Q4DMH8_TRYCC

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Protein
Submitted name: DNA ligase, putative
Gene
Tc00.1047053508881.70
Organism
Trypanosoma cruzi (strain CL Brener)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, putativeImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:Tc00.1047053508881.70Imported
OrganismiTrypanosoma cruzi (strain CL Brener)
Taxonomic identifieri353153 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum
ProteomesiUP000002296: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliQ4DMH8.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 2 hits.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4DMH8-1 [UniParc]FASTAAdd to Basket

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MKACQLRLSF LFALSALRMG RVSRTRLPIT PPANLATFHP AIASSWMTAA    50
SNKLLQPQHV LPTSRKLAWW RCPHCGHEHH KRIDLHVAAG GVCPRCHRMP 100
TLLHPSDASS AVLAIPLVKH RCRPDNSLSV LAAANANRVK SSIADDGYLR 150
VVETRNLQPM LARNFEKESD TIDDDAVLFV SPKLDGVRCI VAWNVRERRP 200
CFFSRSGTLF ECCDHRIEPG LRPLFEKDPN LVLDGELYNH NVDDFEQLIS 250
AIRTTRDRRT PAIAKLQEQL QYHAFDIMYA SKFPDMSVVP FSERHKHLGR 300
LIHGLASSKG QVQEKAVVLV PAAQVKKADI PRLLRLSLAD GYEGIIVRRD 350
GVVSARGENN CSRSGTSRGV NKSSSRGVVV GYAYGARSPN LLKYKVMQDD 400
EYVIVSGVEG RGKWKGCLGA FVCRTKRGHQ FTVAPATTEQ RKKDMWQRLA 450
QYKGKMLTVQ YQELSANGVP RFPIGKCVRG AKNGKDWI 488
Length:488
Mass (Da):54,573
Last modified:September 13, 2005 - v1
Checksum:iBF713188CA214A6D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAHK01000329 Genomic DNA. Translation: EAN93728.1.
RefSeqiXP_815579.1. XM_810486.1.

Genome annotation databases

GeneIDi3547329.
KEGGitcr:508881.70.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAHK01000329 Genomic DNA. Translation: EAN93728.1 .
RefSeqi XP_815579.1. XM_810486.1.

3D structure databases

ProteinModelPortali Q4DMH8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3547329.
KEGGi tcr:508881.70.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 2 hits.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease."
    El-Sayed N.M.A., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G., Tran A.-N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G., Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B., Anupama A., Arner E., Aslund L.
    , Attipoe P., Bontempi E., Bringaud F., Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., Darban H., da Silveira J.F., de Jong P., Edwards K., Englund P.T., Fazelina G., Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., Hou L., Huang Y., Kindlund E., Klingbeil M., Kluge S., Koo H., Lacerda D., Levin M.J., Lorenzi H., Louie T., Machado C.R., McCulloch R., McKenna A., Mizuno Y., Mottram J.C., Nelson S., Ochaya S., Osoegawa K., Pai G., Parsons M., Pentony M., Pettersson U., Pop M., Ramirez J.L., Rinta J., Robertson L., Salzberg S.L., Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J., Sisk E., Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C., Ward P.N., Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D., Andersson B.
    Science 309:409-415(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CL BrenerImported.

Entry informationi

Entry nameiQ4DMH8_TRYCC
AccessioniPrimary (citable) accession number: Q4DMH8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: June 11, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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