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Protein
Submitted name:

DNA ligase, putative

Gene

Tc00.1047053508881.70

Organism
Trypanosoma cruzi (strain CL Brener)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, putativeImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:Tc00.1047053508881.70Imported
OrganismiTrypanosoma cruzi (strain CL Brener)Imported
Taxonomic identifieri353153 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum
Proteomesi
  • UP000002296 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_500423672225 – 488Sequence analysisAdd BLAST464

Proteomic databases

PaxDbiQ4DMH8

Interactioni

Protein-protein interaction databases

STRINGi353153.XP_815579.1

Structurei

3D structure databases

ProteinModelPortaliQ4DMH8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini263 – 427DNA_LIGASE_A3InterPro annotationAdd BLAST165

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IYAX Eukaryota
COG1793 LUCA
KOiK10747

Family and domain databases

InterProiView protein in InterPro
IPR012310 DNA_ligase_ATP-dep_cent
IPR029319 DNA_ligase_OB
IPR025487 DUF4379
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF01068 DNA_ligase_A_M, 1 hit
PF14743 DNA_ligase_OB_2, 1 hit
PF14311 DUF4379, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

Q4DMH8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKACQLRLSF LFALSALRMG RVSRTRLPIT PPANLATFHP AIASSWMTAA
60 70 80 90 100
SNKLLQPQHV LPTSRKLAWW RCPHCGHEHH KRIDLHVAAG GVCPRCHRMP
110 120 130 140 150
TLLHPSDASS AVLAIPLVKH RCRPDNSLSV LAAANANRVK SSIADDGYLR
160 170 180 190 200
VVETRNLQPM LARNFEKESD TIDDDAVLFV SPKLDGVRCI VAWNVRERRP
210 220 230 240 250
CFFSRSGTLF ECCDHRIEPG LRPLFEKDPN LVLDGELYNH NVDDFEQLIS
260 270 280 290 300
AIRTTRDRRT PAIAKLQEQL QYHAFDIMYA SKFPDMSVVP FSERHKHLGR
310 320 330 340 350
LIHGLASSKG QVQEKAVVLV PAAQVKKADI PRLLRLSLAD GYEGIIVRRD
360 370 380 390 400
GVVSARGENN CSRSGTSRGV NKSSSRGVVV GYAYGARSPN LLKYKVMQDD
410 420 430 440 450
EYVIVSGVEG RGKWKGCLGA FVCRTKRGHQ FTVAPATTEQ RKKDMWQRLA
460 470 480
QYKGKMLTVQ YQELSANGVP RFPIGKCVRG AKNGKDWI
Length:488
Mass (Da):54,573
Last modified:September 13, 2005 - v1
Checksum:iBF713188CA214A6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAHK01000329 Genomic DNA Translation: EAN93728.1
RefSeqiXP_815579.1, XM_810486.1

Genome annotation databases

EnsemblProtistsiEAN93728; EAN93728; Tc00.1047053508881.70
GeneDBiTcCLB.508881.70:pep
GeneIDi3547329
KEGGitcr:508881.70

Similar proteinsi

Entry informationi

Entry nameiQ4DMH8_TRYCC
AccessioniPrimary (citable) accession number: Q4DMH8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: March 28, 2018
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health