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Q4DMH8

- Q4DMH8_TRYCC

UniProt

Q4DMH8 - Q4DMH8_TRYCC

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Protein
Submitted name:

DNA ligase, putative

Gene

Tc00.1047053508881.70

Organism
Trypanosoma cruzi (strain CL Brener)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, putativeImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:Tc00.1047053508881.70Imported
OrganismiTrypanosoma cruzi (strain CL Brener)Imported
Taxonomic identifieri353153 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum
ProteomesiUP000002296: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliQ4DMH8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 2 hits.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q4DMH8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKACQLRLSF LFALSALRMG RVSRTRLPIT PPANLATFHP AIASSWMTAA
60 70 80 90 100
SNKLLQPQHV LPTSRKLAWW RCPHCGHEHH KRIDLHVAAG GVCPRCHRMP
110 120 130 140 150
TLLHPSDASS AVLAIPLVKH RCRPDNSLSV LAAANANRVK SSIADDGYLR
160 170 180 190 200
VVETRNLQPM LARNFEKESD TIDDDAVLFV SPKLDGVRCI VAWNVRERRP
210 220 230 240 250
CFFSRSGTLF ECCDHRIEPG LRPLFEKDPN LVLDGELYNH NVDDFEQLIS
260 270 280 290 300
AIRTTRDRRT PAIAKLQEQL QYHAFDIMYA SKFPDMSVVP FSERHKHLGR
310 320 330 340 350
LIHGLASSKG QVQEKAVVLV PAAQVKKADI PRLLRLSLAD GYEGIIVRRD
360 370 380 390 400
GVVSARGENN CSRSGTSRGV NKSSSRGVVV GYAYGARSPN LLKYKVMQDD
410 420 430 440 450
EYVIVSGVEG RGKWKGCLGA FVCRTKRGHQ FTVAPATTEQ RKKDMWQRLA
460 470 480
QYKGKMLTVQ YQELSANGVP RFPIGKCVRG AKNGKDWI
Length:488
Mass (Da):54,573
Last modified:September 13, 2005 - v1
Checksum:iBF713188CA214A6D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAHK01000329 Genomic DNA. Translation: EAN93728.1.
RefSeqiXP_815579.1. XM_810486.1.

Genome annotation databases

GeneIDi3547329.
KEGGitcr:508881.70.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAHK01000329 Genomic DNA. Translation: EAN93728.1 .
RefSeqi XP_815579.1. XM_810486.1.

3D structure databases

ProteinModelPortali Q4DMH8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3547329.
KEGGi tcr:508881.70.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 2 hits.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR025487. DUF4379.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
PF14311. DUF4379. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease."
    El-Sayed N.M., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G., Tran A.N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G., Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B., Anupama A., Arner E., Aslund L.
    , Attipoe P., Bontempi E., Bringaud F., Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., Darban H., da Silveira J.F., de Jong P., Edwards K., Englund P.T., Fazelina G., Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., Hou L., Huang Y., Kindlund E., Klingbeil M., Kluge S., Koo H., Lacerda D., Levin M.J., Lorenzi H., Louie T., Machado C.R., McCulloch R., McKenna A., Mizuno Y., Mottram J.C., Nelson S., Ochaya S., Osoegawa K., Pai G., Parsons M., Pentony M., Pettersson U., Pop M., Ramirez J.L., Rinta J., Robertson L., Salzberg S.L., Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J., Sisk E., Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C., Ward P.N., Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D., Andersson B.
    Science 309:409-415(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CL BrenerImported.

Entry informationi

Entry nameiQ4DMH8_TRYCC
AccessioniPrimary (citable) accession number: Q4DMH8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: October 29, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3