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Q4DMH7

- Q4DMH7_TRYCC

UniProt

Q4DMH7 - Q4DMH7_TRYCC

Protein
Submitted name:

DNA ligase, putative

Gene

Tc00.1047053508881.80

Organism
Trypanosoma cruzi (strain CL Brener)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, putativeImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:Tc00.1047053508881.80Imported
    OrganismiTrypanosoma cruzi (strain CL Brener)Imported
    Taxonomic identifieri353153 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum
    ProteomesiUP000002296: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliQ4DMH7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4DMH7-1 [UniParc]FASTAAdd to Basket

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    MVVARIGART EMWRRCSCLG RAIVQSVDPS LLFGAGRPRT KQQAEKYKEL    50
    KNTTIQAAFP HLAACWVGPC WGTVMITPHH ISPLCLKMAV WRCSECLQEF 100
    EMSIAKFVDQ HGVCPLCKKP QRSLETPNKE PETTNGSSTE GKNGDSNLGS 150
    ATAMTMTTTT KNELVYAKAP RMIHTNYRSV LHDNPEWEEI NIQPMLAQKW 200
    ETVAAELLNP GPGEEKELLL ASPKIDGIRC LIGYNRRRKE PKFFSRGGIL 250
    LECCHGLVPH VMPLFEADPT LVLDGELFAP QCNFEELNGL VRRLEKFTTP 300
    EMRERQAQLL EYFSFDIMHS SQLSSPTAPF SERYRLLKKM VPTCGAKRIS 350
    AYQHDEEKRK IIRQKQRPDN AAAEGTIKLY HVPAAQVGAE EMDEVLEEAC 400
    SQGFEGVMIR RPGFPYEHGK RSFGLLKYKT MHDAEYRIVD FLPGQGKFRG 450
    GLGAFICETK TGIRFNATPK TTYENRLALW GKRQELLGKY LTVQYQELSS 500
    QDVPRFPVAK AVRGASEEEF L 521
    Length:521
    Mass (Da):58,923
    Last modified:September 13, 2005 - v1
    Checksum:iB8460542FC3007F0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAHK01000329 Genomic DNA. Translation: EAN93729.1.
    RefSeqiXP_815580.1. XM_810487.1.

    Genome annotation databases

    GeneIDi3547330.
    KEGGitcr:508881.80.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAHK01000329 Genomic DNA. Translation: EAN93729.1 .
    RefSeqi XP_815580.1. XM_810487.1.

    3D structure databases

    ProteinModelPortali Q4DMH7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 3547330.
    KEGGi tcr:508881.80.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease."
      El-Sayed N.M.A., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G., Tran A.-N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G., Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B., Anupama A., Arner E., Aslund L.
      , Attipoe P., Bontempi E., Bringaud F., Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., Darban H., da Silveira J.F., de Jong P., Edwards K., Englund P.T., Fazelina G., Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., Hou L., Huang Y., Kindlund E., Klingbeil M., Kluge S., Koo H., Lacerda D., Levin M.J., Lorenzi H., Louie T., Machado C.R., McCulloch R., McKenna A., Mizuno Y., Mottram J.C., Nelson S., Ochaya S., Osoegawa K., Pai G., Parsons M., Pentony M., Pettersson U., Pop M., Ramirez J.L., Rinta J., Robertson L., Salzberg S.L., Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J., Sisk E., Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C., Ward P.N., Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D., Andersson B.
      Science 309:409-415(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CL BrenerImported.

    Entry informationi

    Entry nameiQ4DMH7_TRYCC
    AccessioniPrimary (citable) accession number: Q4DMH7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3