Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q4DIW6

- Q4DIW6_TRYCC

UniProt

Q4DIW6 - Q4DIW6_TRYCC

Protein
Submitted name:

DNA ligase, putative

Gene

Tc00.1047053506287.200

Organism
Trypanosoma cruzi (strain CL Brener)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, putativeImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:Tc00.1047053506287.200Imported
    OrganismiTrypanosoma cruzi (strain CL Brener)Imported
    Taxonomic identifieri353153 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum
    ProteomesiUP000002296: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliQ4DIW6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q4DIW6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVLARIGART EMWRRCSCLG RAIVQSVDPS LLFGAGRPRT KQQAEKYKEL    50
    KNTTIQAAFP HLAACWVGPC WGTVMITPHH ISPLCLKIAV WRCSECLQEF 100
    EMSIAKFVDQ HGVCPLCKKP QRSLEAPNKE PETTNGSSTE GKNGDFNLGS 150
    AAAMKMTTTT KNEVVYAKAP RMIHTNYKSV LHDNPEWEEI NIQPMLAQKW 200
    ETVAAELLNP GPGEEKELLL ASPKIDGVRC LIGYNRRKKE PQFFSRSGIL 250
    LECCHGLVPH VMPLFEADPT LVLDGELFAP QCNFEELNGL VRRLEKFTTP 300
    EMRERQAQLL EYFSFDIMHS SQLSSSSAPF SERYRLLKKM VPTCGAKRIS 350
    AYQHDEEKRK IIRQKQRPDN AAAEGTIKLY HVPAAQVGAE EMDEVLEEAC 400
    SQGFEGVMIR RPGFPYEHGK RSFGLLKYKT MHDAEYRIVD FLPGQGKFRG 450
    GLGAFICETK TGIRFNATPK TTYENRLALW GKRQELLGKY LTVQYQELSS 500
    QDVPRFPVAK AVRGTSEEEF L 521
    Length:521
    Mass (Da):58,898
    Last modified:September 13, 2005 - v1
    Checksum:i67C4D46BA24757B4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAHK01000431 Genomic DNA. Translation: EAN92478.1.
    RefSeqiXP_814329.1. XM_809236.1.

    Genome annotation databases

    GeneIDi3545849.
    KEGGitcr:506287.200.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAHK01000431 Genomic DNA. Translation: EAN92478.1 .
    RefSeqi XP_814329.1. XM_809236.1.

    3D structure databases

    ProteinModelPortali Q4DIW6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 3545849.
    KEGGi tcr:506287.200.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease."
      El-Sayed N.M.A., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G., Tran A.-N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G., Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B., Anupama A., Arner E., Aslund L.
      , Attipoe P., Bontempi E., Bringaud F., Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., Darban H., da Silveira J.F., de Jong P., Edwards K., Englund P.T., Fazelina G., Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., Hou L., Huang Y., Kindlund E., Klingbeil M., Kluge S., Koo H., Lacerda D., Levin M.J., Lorenzi H., Louie T., Machado C.R., McCulloch R., McKenna A., Mizuno Y., Mottram J.C., Nelson S., Ochaya S., Osoegawa K., Pai G., Parsons M., Pentony M., Pettersson U., Pop M., Ramirez J.L., Rinta J., Robertson L., Salzberg S.L., Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J., Sisk E., Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C., Ward P.N., Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D., Andersson B.
      Science 309:409-415(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CL BrenerImported.

    Entry informationi

    Entry nameiQ4DIW6_TRYCC
    AccessioniPrimary (citable) accession number: Q4DIW6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3