Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q4DIW6 (Q4DIW6_TRYCC) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.5.1.1 EMBL EAN92478.1
Gene names
ORF Names:Tc00.1047053506287.200 EMBL EAN92478.1
OrganismTrypanosoma cruzi (strain CL Brener) [Complete proteome]
Taxonomic identifier353153 [NCBI]
Taxonomic lineageEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum

Protein attributes

Sequence length521 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAN92478.1

Ontologies

Keywords
   Molecular functionLigase EMBL EAN92478.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q4DIW6 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 67C4D46BA24757B4

FASTA52158,898
        10         20         30         40         50         60 
MVLARIGART EMWRRCSCLG RAIVQSVDPS LLFGAGRPRT KQQAEKYKEL KNTTIQAAFP 

        70         80         90        100        110        120 
HLAACWVGPC WGTVMITPHH ISPLCLKIAV WRCSECLQEF EMSIAKFVDQ HGVCPLCKKP 

       130        140        150        160        170        180 
QRSLEAPNKE PETTNGSSTE GKNGDFNLGS AAAMKMTTTT KNEVVYAKAP RMIHTNYKSV 

       190        200        210        220        230        240 
LHDNPEWEEI NIQPMLAQKW ETVAAELLNP GPGEEKELLL ASPKIDGVRC LIGYNRRKKE 

       250        260        270        280        290        300 
PQFFSRSGIL LECCHGLVPH VMPLFEADPT LVLDGELFAP QCNFEELNGL VRRLEKFTTP 

       310        320        330        340        350        360 
EMRERQAQLL EYFSFDIMHS SQLSSSSAPF SERYRLLKKM VPTCGAKRIS AYQHDEEKRK 

       370        380        390        400        410        420 
IIRQKQRPDN AAAEGTIKLY HVPAAQVGAE EMDEVLEEAC SQGFEGVMIR RPGFPYEHGK 

       430        440        450        460        470        480 
RSFGLLKYKT MHDAEYRIVD FLPGQGKFRG GLGAFICETK TGIRFNATPK TTYENRLALW 

       490        500        510        520 
GKRQELLGKY LTVQYQELSS QDVPRFPVAK AVRGTSEEEF L 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAHK01000431 Genomic DNA. Translation: EAN92478.1.
RefSeqXP_814329.1. XM_809236.1.

3D structure databases

ProteinModelPortalQ4DIW6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3545849.
KEGGtcr:506287.200.

Phylogenomic databases

KOK01971.
ProtClustDBCLSZ2442110.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ4DIW6_TRYCC
AccessionPrimary (citable) accession number: Q4DIW6
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: December 11, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)