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Protein
Submitted name:

Histone deacetylase, putative

Gene

Tc00.1047053504159.80

Organism
Trypanosoma cruzi (strain CL Brener)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Histone deacetylase, putativeImported
Gene namesi
ORF Names:Tc00.1047053504159.80Imported
OrganismiTrypanosoma cruzi (strain CL Brener)Imported
Taxonomic identifieri353153 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum
ProteomesiUP000002296 Componenti: Unassembled WGS sequence

PTM / Processingi

Proteomic databases

PaxDbiQ4D762.

Interactioni

Protein-protein interaction databases

STRINGi353153.XP_810218.1.

Structurei

3D structure databases

ProteinModelPortaliQ4D762.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini75 – 385311Hist_deacetylInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili462 – 48221Sequence analysisAdd
BLAST
Coiled coili486 – 50621Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiCOG0123. LUCA.
KOG1342. Eukaryota.
KOiK06067.

Family and domain databases

Gene3Di3.40.800.20. 2 hits.
InterProiIPR016024. ARM-type_fold.
IPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 3 hits.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
SUPFAMiSSF48371. SSF48371. 1 hit.

Sequencei

Sequence statusi: Complete.

Q4D762-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVFTAAVAGK TSLPPPVAII VGHNIDASAM PITYERNRFV IDMLHHYACP
60 70 80 90 100
VFSHKKSGDA MNTVSSDVFE WVLEPLPVVG VEDMTAFHDR AYLNYLSIRE
110 120 130 140 150
ALSEVDERAS TVKRSRAEGI QPPVSRRSSA QTQPPLRVLP DLVPISTDEE
160 170 180 190 200
YGLVNENMPF VGMWRTIQAT VSGTLLAARL LAQPGRFAAI HWFGGRHHAK
210 220 230 240 250
QRTAGGFCFA NDVVLGVLEL KKLLSSDKNG ILVVDVDAHH GDGTQSAFLH
260 270 280 290 300
DNSVLTLSMH AHGVGIFPGT GGIEETGAGL GRGFTMNVPL PEGATDILAV
310 320 330 340 350
TLMYRAIHFA FKKLGECLAA IVIVCGSDAL SGDPLGALNL TVGGMQSIIR
360 370 380 390 400
ILLKEAARRS LKVLLLGAGG YVDTSCARLA GVVTKDVLSC AAAMRLGKAE
410 420 430 440 450
YFGDSANLGD NLGVAVPEGC EYFTRYGPSF LMHGLPPARV SKLYRLPYGS
460 470 480 490 500
PLFMRMQRAA TKEALRRRRN QEQDEEEDDD EEGEEEDEEE GEEEDEEEDE
510
EEGEEEGEGE EEEEGEEEA
Length:519
Mass (Da):56,388
Last modified:September 13, 2005 - v1
Checksum:i0AA6B74FD7B51F7C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAHK01000895 Genomic DNA. Translation: EAN88367.1.
RefSeqiXP_810218.1. XM_805125.1.

Genome annotation databases

EnsemblProtistsiEAN88367; EAN88367; Tc00.1047053504159.80.
GeneIDi3540953.
KEGGitcr:504159.80.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAHK01000895 Genomic DNA. Translation: EAN88367.1.
RefSeqiXP_810218.1. XM_805125.1.

3D structure databases

ProteinModelPortaliQ4D762.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi353153.XP_810218.1.

Proteomic databases

PaxDbiQ4D762.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiEAN88367; EAN88367; Tc00.1047053504159.80.
GeneIDi3540953.
KEGGitcr:504159.80.

Phylogenomic databases

eggNOGiCOG0123. LUCA.
KOG1342. Eukaryota.
KOiK06067.

Family and domain databases

Gene3Di3.40.800.20. 2 hits.
InterProiIPR016024. ARM-type_fold.
IPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 3 hits.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
SUPFAMiSSF48371. SSF48371. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease."
    El-Sayed N.M.A., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G., Tran A.-N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G., Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B., Anupama A., Arner E., Aslund L.
    , Attipoe P., Bontempi E., Bringaud F., Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., Darban H., da Silveira J.F., de Jong P., Edwards K., Englund P.T., Fazelina G., Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., Hou L., Huang Y., Kindlund E., Klingbeil M., Kluge S., Koo H., Lacerda D., Levin M.J., Lorenzi H., Louie T., Machado C.R., McCulloch R., McKenna A., Mizuno Y., Mottram J.C., Nelson S., Ochaya S., Osoegawa K., Pai G., Parsons M., Pentony M., Pettersson U., Pop M., Ramirez J.L., Rinta J., Robertson L., Salzberg S.L., Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J., Sisk E., Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C., Ward P.N., Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D., Andersson B.
    Science 309:409-415(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CL BrenerImported.

Entry informationi

Entry nameiQ4D762_TRYCC
AccessioniPrimary (citable) accession number: Q4D762
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: December 9, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.