Reviewed, UniProtKB/Swiss-Prot Q49ZR6 (ARAB1_STAS1)

Names and origin

Protein names

Recommended name:
    Ribulokinase 1
    EC=2.7.1.16

Gene names

Name:	araB1
Ordered Locus Names:	SSP0563

Organism

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) [Complete proteome] [HAMAP]

Taxonomic identifier

342451 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Staphylococcus

Protein attributes

Sequence length	538 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacteria route): step 2/3. HAMAP MF_00520
Sequence similarities	Belongs to the ribulokinase family.

Ontologies

Keywords
Biological process	Arabinose catabolism Carbohydrate metabolism
Ligand	ATP-binding Nucleotide-binding
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 538	538	Ribulokinase 1 HAMAP MF_00520		PRO_0000198374

Sequences

	Sequence		Length	Mass (Da)
	Q49ZR6-1 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: FBEE912A62822250	FASTA	538	59,629
	10 20 30 40 50 60 MTYSIGIDYG TASGRVFLVD TTNGEIISTY IKEYPHGTIS ESLNGTELPH NYFLQHAADY 70 80 90 100 110 120 TSILEEGVQY VLKDSQVDPK SIIGIGIDFT SCTIVFLDDD FKPLHLHPDL EDQPHAYVKL 130 140 150 160 170 180 WKHHGAQDEA TYMKQVSDKV NPSWLNFYGH NVNSEWMIPK ILEVKNKAPE VLERSAYIME 190 200 210 220 230 240 AGDYLVSLLT DKNIRSNCGI GFKGFYNETD GFNYSFFEAI DQELPEIVKT KCESPVVNIG 250 260 270 280 290 300 ESAGSLSPYY QNLWGLTEQV QISPYIIDAH SGVLGVGAIE QGEFTPVIGT STCHLMLDPK 310 320 330 340 350 360 QEPIPAITGS VKDAIIPGLY AYEAGQAAVG DLFNYSASLA PKSYVDQAEK QGLSILGYLE 370 380 390 400 410 420 KLAADISIDK QHVTVLDWHN GNRSILSDSK LTGSIFGLTL QTPFEMIHKA YLESTAFGTK 430 440 450 460 470 480 MIMQQFENNH IPVETVYAAG GIPIKSELLV DIYANVLNKE VVVIDSSNAT ALGAAMLGAN 490 500 510 520 530 VGGAYPTLKE TVKHMKQPVY YRKQPEAKKV KQYALLFDRY KALHDLLGKE YPQLSYIN

References

[1]

"Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection." Kuroda M., Yamashita A., Hirakawa H., Kumano M., Morikawa K., Higashide M., Maruyama A., Inose Y., Matoba K., Toh H., Kuhara S., Hattori M., Ohta T. Proc. Natl. Acad. Sci. U.S.A. 102:13272-13277(2005) [PubMed: 16135568] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AP008934 Genomic DNA. Translation: BAE17708.1.
RefSeq	YP_300653.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3616856.
GenomeReviews	Gene locus SSP0563 in contig AP008934_GR.
KEGG	ssp:SSP0563.
NMPDR	fig|342451.4.peg.550.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q49ZR6.
OMA	Q49ZR6. IMEAGDY.
Enzyme and pathway databases
BioCyc	SSAP342451:SSP0563-MON.
Family and domain databases
HAMAP	MF_00520. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. [Graphical view]
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ARAB1_STAS1

Accession

Primary (citable) accession number: Q49ZR6

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 22, 2005
Last sequence update:	September 13, 2005
Last modified:	June 16, 2009
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)