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Q49YU3

- GATB_STAS1

UniProt

Q49YU3 - GATB_STAS1

Protein

Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

Gene

gatB

Organism
Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
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    Functioni

    Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).UniRule annotation

    Catalytic activityi

    ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate.UniRule annotation
    ATP + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + phosphate + L-asparaginyl-tRNA(Asn) + L-glutamate.UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. carbon-nitrogen ligase activity, with glutamine as amido-N-donor Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-KW

    Keywords - Molecular functioni

    Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciSSAP342451:GKFA-911-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BUniRule annotation (EC:6.3.5.-UniRule annotation)
    Short name:
    Asp/Glu-ADT subunit BUniRule annotation
    Gene namesi
    Name:gatBUniRule annotation
    Ordered Locus Names:SSP0892
    OrganismiStaphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
    Taxonomic identifieri342451 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000006371: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 475475Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BPRO_0000241279Add
    BLAST

    Proteomic databases

    PRIDEiQ49YU3.

    Interactioni

    Subunit structurei

    Heterotrimer of A, B and C subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi342451.SSP0892.

    Structurei

    3D structure databases

    ProteinModelPortaliQ49YU3.
    SMRiQ49YU3. Positions 3-406.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GatB/GatE family. GatB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0064.
    HOGENOMiHOG000223742.
    KOiK02434.
    OMAiWIEIEVE.
    OrthoDBiEOG6RJV5B.

    Family and domain databases

    Gene3Di1.10.10.410. 1 hit.
    HAMAPiMF_00121. GatB.
    InterProiIPR004413. Apn/Gln-ADT_bsu.
    IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
    IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
    IPR018027. Asn/Gln_amidotransferase.
    IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
    IPR023168. GatB_Yqey_C.
    IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
    [Graphical view]
    PANTHERiPTHR11659. PTHR11659. 1 hit.
    PfamiPF02934. GatB_N. 1 hit.
    PF02637. GatB_Yqey. 1 hit.
    [Graphical view]
    SMARTiSM00845. GatB_Yqey. 1 hit.
    [Graphical view]
    SUPFAMiSSF89095. SSF89095. 1 hit.
    TIGRFAMsiTIGR00133. gatB. 1 hit.
    PROSITEiPS01234. GATB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q49YU3-1 [UniParc]FASTAAdd to Basket

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    MHFETVIGLE VHVELKTDSK MFSPAPAHFG AKPNSNTNVI DLAYPGVLPV    50
    VNRRAVDWAM RASMALNMEI ATESKFDRKN YFYPDNPKAY QISQFDQPIG 100
    ENGYIDIEVD GETKRIGITR LHMEEDAGKS THKDGYSLVD LNRQGTPLIE 150
    IVSEPDIRSP QEAYAYLEKL RSIIQYTGVS DCKMEEGSLR CDANISLRPY 200
    GQEEFGTKAE LKNLNSFTYV RKGLEYEEKR QEEELLNGGE ILQETRRFDE 250
    SNGKTLLMRV KEGSDDYRYF PEPDIVPLYV DEEWKERVRQ TIPELPDERK 300
    EKYVNQYGLP AYDAHVLTLT KEMSDFFEGA VAEGADVKLT SNWLMGGVNE 350
    YLNKNQIDLL DTKLTPENLA GMIKLIEDGT MSSKIAKKVF PELAENGGDA 400
    KQIMEDKGLV QISDEATLLK FVNEALDNNE QSIEDYKNGK GKAMGFLVGQ 450
    IMKASKGQAN PQLVNQLLKQ ELDKR 475
    Length:475
    Mass (Da):53,829
    Last modified:September 13, 2005 - v1
    Checksum:i62202720AF90ED5D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008934 Genomic DNA. Translation: BAE18037.1.
    RefSeqiYP_300982.1. NC_007350.1.

    Genome annotation databases

    EnsemblBacteriaiBAE18037; BAE18037; SSP0892.
    GeneIDi3617088.
    KEGGissp:SSP0892.
    PATRICi19623290. VBIStaSap90642_0891.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008934 Genomic DNA. Translation: BAE18037.1 .
    RefSeqi YP_300982.1. NC_007350.1.

    3D structure databases

    ProteinModelPortali Q49YU3.
    SMRi Q49YU3. Positions 3-406.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 342451.SSP0892.

    Proteomic databases

    PRIDEi Q49YU3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAE18037 ; BAE18037 ; SSP0892 .
    GeneIDi 3617088.
    KEGGi ssp:SSP0892.
    PATRICi 19623290. VBIStaSap90642_0891.

    Phylogenomic databases

    eggNOGi COG0064.
    HOGENOMi HOG000223742.
    KOi K02434.
    OMAi WIEIEVE.
    OrthoDBi EOG6RJV5B.

    Enzyme and pathway databases

    BioCyci SSAP342451:GKFA-911-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.410. 1 hit.
    HAMAPi MF_00121. GatB.
    InterProi IPR004413. Apn/Gln-ADT_bsu.
    IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
    IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
    IPR018027. Asn/Gln_amidotransferase.
    IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
    IPR023168. GatB_Yqey_C.
    IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
    [Graphical view ]
    PANTHERi PTHR11659. PTHR11659. 1 hit.
    Pfami PF02934. GatB_N. 1 hit.
    PF02637. GatB_Yqey. 1 hit.
    [Graphical view ]
    SMARTi SM00845. GatB_Yqey. 1 hit.
    [Graphical view ]
    SUPFAMi SSF89095. SSF89095. 1 hit.
    TIGRFAMsi TIGR00133. gatB. 1 hit.
    PROSITEi PS01234. GATB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection."
      Kuroda M., Yamashita A., Hirakawa H., Kumano M., Morikawa K., Higashide M., Maruyama A., Inose Y., Matoba K., Toh H., Kuhara S., Hattori M., Ohta T.
      Proc. Natl. Acad. Sci. U.S.A. 102:13272-13277(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 15305 / DSM 20229.

    Entry informationi

    Entry nameiGATB_STAS1
    AccessioniPrimary (citable) accession number: Q49YU3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3