Q49XE2 (MSCL_STAS1) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 47.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Large-conductance mechanosensitive channel | ||||
| Gene names |
| ||||
| Organism | Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 342451 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Staphylococcus |
Protein attributes
| Sequence length | 117 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell By similarity. HAMAP MF_00115 |
| Subunit structure | Homopentamer By similarity. HAMAP MF_00115 |
| Subcellular location | Cell membrane; Multi-pass membrane protein By similarity HAMAP MF_00115. |
| Sequence similarities | Belongs to the MscL family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Transport |
| Cellular component | Cell membrane Membrane |
| Domain | Transmembrane Transmembrane helix |
| Molecular function | Ionic channel |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ion channel activity Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 117 | 117 | Large-conductance mechanosensitive channel HAMAP MF_00115 | PRO_0000238041 | |||||
Regions | |||||||||
| Transmembrane | 7 – 27 | 21 | Helical; Potential | ||||||
| Transmembrane | 30 – 50 | 21 | Helical; Potential | ||||||
| Transmembrane | 64 – 84 | 21 | Helical; Potential | ||||||
Sequences
References
| [1] | "Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection." Kuroda M., Yamashita A., Hirakawa H., Kumano M., Morikawa K., Higashide M., Maruyama A., Inose Y., Matoba K., Toh H., Kuhara S., Hattori M., Ohta T. Proc. Natl. Acad. Sci. U.S.A. 102:13272-13277(2005) [PubMed: 16135568] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15305 / DSM 20229. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AP008934 Genomic DNA. Translation: BAE18555.1. |
| RefSeq | YP_301500.1. NC_007350.1. |
3D structure databases | |
| ProteinModelPortal | Q49XE2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q49XE2. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | EBSTAT00000048698; EBSTAP00000047067; EBSTAG00000048695. |
| GeneID | 3615349. |
| GenomeReviews | Gene locus SSP1410 in contig AP008934_GR. |
| KEGG | ssp:SSP1410. |
| NMPDR | fig|342451.4.peg.765. |
| PATRIC | 19624412. VBIStaSap90642_1413. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG1970. |
| GeneTree | EBGT00050000025511. |
| HOGENOM | HBG727604. |
| OMA | VIDFVIV. |
| PhylomeDB | Q49XE2. |
| ProtClustDB | PRK13954. |
Enzyme and pathway databases | |
| BioCyc | SSAP342451:SSP1410-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00115. MscL. [Tree] |
| InterPro | IPR019823. Mechanosensitive_channel_CS. IPR001185. MS_channel. [Graphical view] |
| KO | K03282. |
| Pfam | PF01741. MscL. 1 hit. [Graphical view] |
| PRINTS | PR01264. MECHCHANNEL. |
| SUPFAM | SSF81330. MS_channel. 1 hit. |
| TIGRFAMs | TIGR00220. MscL. 1 hit. |
| PROSITE | PS01327. MSCL. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | MSCL_STAS1 | ||||||||
| Accession | Primary (citable) accession number: Q49XE2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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