Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q49XE2 (MSCL_STAS1) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Large-conductance mechanosensitive channel
Gene names
Name:mscL
Ordered Locus Names:SSP1410
OrganismStaphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) [Complete proteome] [HAMAP]
Taxonomic identifier342451 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesStaphylococcus

Protein attributes

Sequence length117 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell By similarity. HAMAP MF_00115

Subunit structure

Homopentamer By similarity. HAMAP MF_00115

Subcellular location

Cell membrane; Multi-pass membrane protein By similarity HAMAP MF_00115.

Sequence similarities

Belongs to the MscL family.

Ontologies

Keywords
   Biological processIon transport
Transport
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Molecular functionIonic channel
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionion channel activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 117117Large-conductance mechanosensitive channel HAMAP MF_00115
PRO_0000238041

Regions

Transmembrane7 – 2721Helical; Potential
Transmembrane30 – 5021Helical; Potential
Transmembrane64 – 8421Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q49XE2 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: B701AA9597A8E1B3

FASTA11713,275
        10         20         30         40         50         60 
MLKEFKEFAL KGNVLDLAVA VVMGAAFNKI VTALVSYIIM PLIGLIFGTV DFAESWSFMG 

        70         80         90        100        110 
IKYGMFVQSI IDFIIIAFAL FIFVKIANTL MKKEEEEEIE ENTVLLTEIR DLLREKN 

« Hide

References

[1]"Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection."
Kuroda M., Yamashita A., Hirakawa H., Kumano M., Morikawa K., Higashide M., Maruyama A., Inose Y., Matoba K., Toh H., Kuhara S., Hattori M., Ohta T.
Proc. Natl. Acad. Sci. U.S.A. 102:13272-13277(2005) [PubMed: 16135568] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15305 / DSM 20229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008934 Genomic DNA. Translation: BAE18555.1.
RefSeqYP_301500.1. NC_007350.1.

3D structure databases

ProteinModelPortalQ49XE2.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ49XE2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBSTAT00000048698; EBSTAP00000047067; EBSTAG00000048695.
GeneID3615349.
GenomeReviewsGene locus SSP1410 in contig AP008934_GR.
KEGGssp:SSP1410.
NMPDRfig|342451.4.peg.765.
PATRIC19624412. VBIStaSap90642_1413.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1970.
GeneTreeEBGT00050000025511.
HOGENOMHBG727604.
OMAVIDFVIV.
PhylomeDBQ49XE2.
ProtClustDBPRK13954.

Enzyme and pathway databases

BioCycSSAP342451:SSP1410-MONOMER.

Family and domain databases

HAMAPMF_00115. MscL.
[Tree]
InterProIPR019823. Mechanosensitive_channel_CS.
IPR001185. MS_channel.
[Graphical view]
KOK03282.
PfamPF01741. MscL. 1 hit.
[Graphical view]
PRINTSPR01264. MECHCHANNEL.
SUPFAMSSF81330. MS_channel. 1 hit.
TIGRFAMsTIGR00220. MscL. 1 hit.
PROSITEPS01327. MSCL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMSCL_STAS1
AccessionPrimary (citable) accession number: Q49XE2
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: September 13, 2005
Last modified: January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families