Reviewed, UniProtKB/Swiss-Prot Q49V87 (ARAB2_STAS1)

Names and origin

Protein names

Recommended name:
    Ribulokinase 2
    EC=2.7.1.16

Gene names

Name:	araB2
Ordered Locus Names:	SSP2178

Organism

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) [Complete proteome] [HAMAP]

Taxonomic identifier

342451 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Staphylococcus

Protein attributes

Sequence length	542 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520
Sequence similarities	Belongs to the ribulokinase family.

Ontologies

Keywords
Biological process	Arabinose catabolism Carbohydrate metabolism
Ligand	ATP-binding Nucleotide-binding
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 542	542	Ribulokinase 2 HAMAP MF_00520		PRO_0000198375

Sequences

	Sequence		Length	Mass (Da)
	Q49V87-1 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 3E037DDC60726662	FASTA	542	60,094
	10 20 30 40 50 60 MTYSIGIDFG TGSGRVFLVN TENGEIIGQY VQTYAHGTIE GELNGHKLPQ SYALQNANDY 70 80 90 100 110 120 MEVIETGIPE ILAKTNIDAK DIVGIGIDFT SSTVIFVDDQ MEPMHNNPKF YNNPHAYVKL 130 140 150 160 170 180 WKHHGAQAEA DLLFNTAIEE KNRWLGYYGF NVSSEWMIPK IMEVNDKAPE VMTETADIME 190 200 210 220 230 240 AGDWIVNRLT GENVRSNCGL GFKSFWESST GFHYDLFDKV DDNLSDIVRT KVEAPIVSIG 250 260 270 280 290 300 ESVGTVSAEM AHKLGLSPET VVSPFIIDAH SSLLGIGAEK DKEMTMVMGT STCHLMLNKE 310 320 330 340 350 360 QHKVPGISGS VKGAIIPDLY AYEAGQTAVG DLFEYVANQS PYEYVKTAED RGISIFELLN 370 380 390 400 410 420 EKASQRYPGE SGLIALDWHN GNRSVLSDSN LKGSLFGLSL QTKHEDIYRA YMEATAFGTK 430 440 450 460 470 480 MIMQQYQGWQ MEVERVFACG GIPKKNHLLM EIYANVLNKK ITVIDSEYAP AIGAAILGAI 490 500 510 520 530 540 CGGAHPNFSS AIQAMKEPVL YQVEPDHAQV LIYKKLFNAY KELHDLLGYK KARIMRNVSA LM

References

[1]

"Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection." Kuroda M., Yamashita A., Hirakawa H., Kumano M., Morikawa K., Higashide M., Maruyama A., Inose Y., Matoba K., Toh H., Kuhara S., Hattori M., Ohta T. Proc. Natl. Acad. Sci. U.S.A. 102:13272-13277(2005) [PubMed: 16135568] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008934 Genomic DNA. Translation: BAE19323.1.
RefSeq	YP_302268.1.
3D structure databases
SMR	Q49V87. Positions 2-523.
ModBase	Search...
Protein-protein interaction databases
STRING	Q49V87.
Genome annotation databases
GeneID	3616424.
GenomeReviews	Gene locus SSP2178 in contig AP008934_GR.
KEGG	ssp:SSP2178.
NMPDR	fig|342451.4.peg.1856.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1069.
HOGENOM	HBG312681.
OMA	NGRRTPD.
PhylomeDB	Q49V87.
Enzyme and pathway databases
BioCyc	SSAP342451:SSP2178-MONOMER.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ARAB2_STAS1

Accession

Primary (citable) accession number: Q49V87

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 22, 2005
Last sequence update:	September 13, 2005
Last modified:	January 19, 2010
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)