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Protein
Submitted name:

COL4A5 protein

Gene

COL4A5

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
COL4A5 proteinImported
Gene namesi
Name:COL4A5Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiQ49AM6.
PeptideAtlasiQ49AM6.
PRIDEiQ49AM6.

Expressioni

Gene expression databases

GenevisibleiQ49AM6. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000331902.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3544. Eukaryota.
ENOG410XNMM. LUCA.
HOGENOMiHOG000085652.
HOVERGENiHBG004933.
KOiK06237.

Family and domain databases

InterProiIPR008160. Collagen.
[Graphical view]
PfamiPF01391. Collagen. 10 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q49AM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPPGPPGFP GERGQKGDEG PPGISIPGPP GLDGQPGAPG LPGPPGPAGP
60 70 80 90 100
HIPPSDEICE PGPPGPPGSP GDKGLQGEQG VKGDKGDTCF NCIGTGISGP
110 120 130 140 150
PGQPGLPGLP GPPGSLGFPG QKGEKGQAGA TGPKGLPGIP GAPGAPGFPG
160 170 180 190 200
SKGEPGDILT FPGMKGDKGE LGSPGAPGLP GLPGTPGQDG LPGLPGPKGE
210 220 230 240 250
PGGITFKGER GPPGNPGLPG LPGNIGPMGP PGFGPPGPVG EKGIQGVAGN
260 270 280 290 300
PGQPGIPGPK GDPGQTITQP GKPGLPGNPG RDGDVGLPGD PGLPGQPGLP
310 320 330 340 350
GIPGSKGEPG IPGIGLPGPP GPKGFPGIPG PPGAPGTPGR IGLEGPPGPP
360 370 380 390 400
GFPGPKGEPG FALPGPPGPP GLPGFKGALG PKGDRGFPGP PGPPGRTGLD
410 420 430 440 450
GLPGPKGDVG PNGQPGPMGP PGLPGIGVQG PPGPPGIPGP IGQPGLHGIP
460 470 480 490 500
GEKGDPGPPG LDVPGPPGER GSPGIPGAPG PIGPPGSPGL PGKAGASGFP
510 520 530 540 550
GTKGEMGMMG PPGPPGPLGI PGRSGVPGLK GDDGLQGQPG LPGPTGEKGS
560 570 580 590 600
KGEPGLPGPP GPMDPNLLGS KGEKGEPGLP GIPGVSGPKG YQGLPGDPGQ
610 620 630 640 650
PGLSGQPGLP GPPGPKGNPG LPGQPGLIGP PGLKGTIGDM GFPGPQGVEG
660 670 680 690
PPGPSGVPGQ PGSPGLPGQK GDKGDPGISS IGLPGLPGPK VIFGI
Length:695
Mass (Da):64,324
Last modified:September 13, 2005 - v1
Checksum:i91FAB53FB30A3120
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC035387 mRNA. Translation: AAH35387.1.
RefSeqiNP_000486.1. NM_000495.4.
NP_203699.1. NM_033380.2.
UniGeneiHs.369089.

Genome annotation databases

GeneIDi1287.
KEGGihsa:1287.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC035387 mRNA. Translation: AAH35387.1.
RefSeqiNP_000486.1. NM_000495.4.
NP_203699.1. NM_033380.2.
UniGeneiHs.369089.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000331902.

Proteomic databases

PaxDbiQ49AM6.
PeptideAtlasiQ49AM6.
PRIDEiQ49AM6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1287.
KEGGihsa:1287.

Organism-specific databases

CTDi1287.

Phylogenomic databases

eggNOGiKOG3544. Eukaryota.
ENOG410XNMM. LUCA.
HOGENOMiHOG000085652.
HOVERGENiHBG004933.
KOiK06237.

Miscellaneous databases

GenomeRNAii1287.

Gene expression databases

GenevisibleiQ49AM6. HS.

Family and domain databases

InterProiIPR008160. Collagen.
[Graphical view]
PfamiPF01391. Collagen. 10 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.

Entry informationi

Entry nameiQ49AM6_HUMAN
AccessioniPrimary (citable) accession number: Q49AM6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: July 6, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.