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Protein
Submitted name:

FERMT1 protein

Gene

FERMT1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
FERMT1 proteinImported
Gene namesi
Name:FERMT1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162388314.

PTM / Processingi

Proteomic databases

MaxQBiQ49AC8.
PaxDbiQ49AC8.
PRIDEiQ49AC8.

Expressioni

Gene expression databases

GenevisibleiQ49AC8. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000217289.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini120 – 21697PHInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 PH domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG3727. Eukaryota.
ENOG410XS1B. LUCA.
HOVERGENiHBG020688.
KOiK17082.

Family and domain databases

Gene3Di1.20.80.10. 2 hits.
2.30.29.30. 2 hits.
InterProiIPR014352. FERM/acyl-CoA-bd_prot_3-hlx.
IPR019748. FERM_central.
IPR011993. PH_dom-like.
IPR001849. PH_domain.
[Graphical view]
PfamiPF00373. FERM_M. 1 hit.
PF00169. PH. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
[Graphical view]
SUPFAMiSSF47031. SSF47031. 2 hits.
SSF50729. SSF50729. 2 hits.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q49AC8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQGIKEDEQ LLLRFKYYSF FDLNPKYDAV QINQLYEQAR WAILLEEIDC
60 70 80 90 100
TEEEMLIFAA LQYHISKLSL SAETQDFAGE SEVDEIEAAL SNLEVTLEGG
110 120 130 140 150
KADSLLEDIT DIPKLADNLK LFRPKKLLPK AFKQYWFIFK DTSIAYFKNK
160 170 180 190 200
ELEQGEPLEK LNLRGCEVVP DVNVAGRKFG IKLLIPVADG MNEMYLRCDH
210 220 230 240 250
ENQYAQWMAA CMLASKGKTM ADSSYQPEVL NILSFLRMKN RNSASQVASS
260 270 280 290 300
LENMDMNPEC FVSPRCAKRH KSKQLAARIL EAHQNVAQMP LVEAKLRFIQ
310 320 330 340 350
AWQSLPEFGL TYYLVRFKGS KKDDILGVSY NRLIKIDAAT GIPVTTWRFT
360 370 380 390 400
NIKQWNVNWE TRQVVIEFDQ NVFTAFTCLS ADCKIVHEYI GGYIFLSTRS
410 420
KDQNETLDED LFHKLTGGQD
Length:420
Mass (Da):48,267
Last modified:September 13, 2005 - v1
Checksum:i378D0F836A3BA1AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC040545 mRNA. Translation: AAH40545.1.
RefSeqiNP_060141.3. NM_017671.4.
UniGeneiHs.472054.

Genome annotation databases

GeneIDi55612.
KEGGihsa:55612.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC040545 mRNA. Translation: AAH40545.1.
RefSeqiNP_060141.3. NM_017671.4.
UniGeneiHs.472054.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000217289.

Proteomic databases

MaxQBiQ49AC8.
PaxDbiQ49AC8.
PRIDEiQ49AC8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi55612.
KEGGihsa:55612.

Organism-specific databases

CTDi55612.
PharmGKBiPA162388314.

Phylogenomic databases

eggNOGiKOG3727. Eukaryota.
ENOG410XS1B. LUCA.
HOVERGENiHBG020688.
KOiK17082.

Miscellaneous databases

ChiTaRSiFERMT1. human.
GenomeRNAii55612.

Gene expression databases

GenevisibleiQ49AC8. HS.

Family and domain databases

Gene3Di1.20.80.10. 2 hits.
2.30.29.30. 2 hits.
InterProiIPR014352. FERM/acyl-CoA-bd_prot_3-hlx.
IPR019748. FERM_central.
IPR011993. PH_dom-like.
IPR001849. PH_domain.
[Graphical view]
PfamiPF00373. FERM_M. 1 hit.
PF00169. PH. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
[Graphical view]
SUPFAMiSSF47031. SSF47031. 2 hits.
SSF50729. SSF50729. 2 hits.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.

Entry informationi

Entry nameiQ49AC8_HUMAN
AccessioniPrimary (citable) accession number: Q49AC8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: June 8, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.