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Protein
Submitted name:

Ppa1 protein

Gene

Ppa1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_314370. Cytosolic tRNA aminoacylation.

Names & Taxonomyi

Protein namesi
Submitted name:
Ppa1 proteinImported
Gene namesi
Name:Ppa1Imported
Synonyms:PypImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1589773. Ppa1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ499R7.
PRIDEiQ499R7.

Expressioni

Gene expression databases

ExpressionAtlasiQ499R7. baseline.
GenevisibleiQ499R7. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000674.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0221.
HOGENOMiHOG000195569.
HOVERGENiHBG000491.
KOiK01507.
PhylomeDBiQ499R7.
TreeFamiTF300887.

Family and domain databases

Gene3Di3.90.80.10. 1 hit.
InterProiIPR008162. Pyrophosphatase.
[Graphical view]
PANTHERiPTHR10286. PTHR10286. 1 hit.
PfamiPF00719. Pyrophosphatase. 1 hit.
[Graphical view]
SUPFAMiSSF50324. SSF50324. 1 hit.
PROSITEiPS00387. PPASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q499R7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PAGQLVVRRR ELPPRYNRSE AGLCGCVAVQ RRRRRHRHIS DTMSSFSSEE
60 70 80 90 100
RAAPFTLEYR VFIKNEKGQY ISPFHDVPIY ADKDVFHMVV EVPRWSNAKM
110 120 130 140 150
EIATKDPLNP IKQDVKKGKL RYVANLFPYK GYIWNYGAIP QTWEDPGHSD
160 170 180 190 200
EHTGCCGDND PIDVCEIGSK VCARGEIIRV KVLGILAMID EGETDWKVIA
210 220 230 240 250
INVDDPDAAN YHDISDVERL KPGYLEATVD WFRRYKVPDG KPENEFAFNA
260 270 280 290 300
EFKNKEFAVD IIKNTHDYWK ALVTKKTDGK GISCMNTTVS ESPFKCDPDA
310 320 330
AKAIVDALPP PCESACALPM DVDKWFHHQK N
Length:331
Mass (Da):37,677
Last modified:September 13, 2005 - v1
Checksum:iD8ACF88D11C9EFD3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC099794 mRNA. Translation: AAH99794.1.
RefSeqiNP_001094304.1. NM_001100834.1.
UniGeneiRn.106916.

Genome annotation databases

GeneIDi294504.
KEGGirno:294504.
UCSCiRGD:1589773. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC099794 mRNA. Translation: AAH99794.1.
RefSeqiNP_001094304.1. NM_001100834.1.
UniGeneiRn.106916.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000674.

Proteomic databases

PaxDbiQ499R7.
PRIDEiQ499R7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi294504.
KEGGirno:294504.
UCSCiRGD:1589773. rat.

Organism-specific databases

CTDi5464.
RGDi1589773. Ppa1.

Phylogenomic databases

eggNOGiCOG0221.
HOGENOMiHOG000195569.
HOVERGENiHBG000491.
KOiK01507.
PhylomeDBiQ499R7.
TreeFamiTF300887.

Enzyme and pathway databases

ReactomeiREACT_314370. Cytosolic tRNA aminoacylation.

Miscellaneous databases

NextBioi638225.

Gene expression databases

ExpressionAtlasiQ499R7. baseline.
GenevisibleiQ499R7. RN.

Family and domain databases

Gene3Di3.90.80.10. 1 hit.
InterProiIPR008162. Pyrophosphatase.
[Graphical view]
PANTHERiPTHR10286. PTHR10286. 1 hit.
PfamiPF00719. Pyrophosphatase. 1 hit.
[Graphical view]
SUPFAMiSSF50324. SSF50324. 1 hit.
PROSITEiPS00387. PPASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: ProstateImported.

Entry informationi

Entry nameiQ499R7_RAT
AccessioniPrimary (citable) accession number: Q499R7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: July 22, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.