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Protein

Ankyrin repeat domain-containing protein 16

Gene

Ankrd16

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Ankyrin repeat domain-containing protein 16
Gene namesi
Name:Ankrd16
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 17

Organism-specific databases

RGDi1311405. Ankrd16.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 370370Ankyrin repeat domain-containing protein 16PRO_0000240832Add
BLAST

Proteomic databases

PaxDbiQ499M5.
PRIDEiQ499M5.

Expressioni

Gene expression databases

GenevisibleiQ499M5. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000025011.

Structurei

3D structure databases

ProteinModelPortaliQ499M5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati45 – 7531ANK 1Add
BLAST
Repeati79 – 10830ANK 2Add
BLAST
Repeati112 – 14130ANK 3Add
BLAST
Repeati145 – 17430ANK 4Add
BLAST
Repeati179 – 20931ANK 5Add
BLAST
Repeati213 – 24230ANK 6Add
BLAST
Repeati247 – 27731ANK 7Add
BLAST
Repeati282 – 31130ANK 8Add
BLAST
Repeati315 – 34430ANK 9Add
BLAST

Sequence similaritiesi

Contains 9 ANK repeats.PROSITE-ProRule annotation

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

eggNOGiKOG0504. Eukaryota.
COG0666. LUCA.
GeneTreeiENSGT00840000129781.
HOGENOMiHOG000015234.
HOVERGENiHBG056770.
InParanoidiQ499M5.
OMAiHMACIGQ.
OrthoDBiEOG7N63NG.
PhylomeDBiQ499M5.

Family and domain databases

Gene3Di1.25.40.20. 2 hits.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
[Graphical view]
PfamiPF12796. Ank_2. 2 hits.
[Graphical view]
PRINTSiPR01415. ANKYRIN.
SMARTiSM00248. ANK. 9 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q499M5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPPGDPRRL CRLVQEGQLR ALREELEVAG GCWDPEMFRG SQGPAGDTLL
60 70 80 90 100
HFASRHGRQD ILAYLVEAWS MDIEAANRDY KRPLHEAASM GHRDCVRYLL
110 120 130 140 150
GRGAVVDSLK KADWTPLMMA CTRKNLEVIQ DLVEHGANPL LKNKDGWNSF
160 170 180 190 200
HIASREGDPV ILRYLLTVCP DVWKTESKIR RTPLHTAAMH GCFEAVQELL
210 220 230 240 250
ERCHYEPDCR DNCGVTPFMD AIQCGHVSIA KLLLENHEAC SSATDSLGAQ
260 270 280 290 300
ALHRAAVTGQ DEAIRFLVCG LGIDVDVRAK SSQLTALLYA AKEGQTSTVQ
310 320 330 340 350
TLLSLGADIN STDERNRSAL HLACAGQHAA CARFLRQSGL KDSADLTGAL
360 370
AQQLTRGVAI LQDFDPGVKS
Length:370
Mass (Da):40,560
Last modified:September 13, 2005 - v1
Checksum:iEFF510C923D3F6B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC099837 mRNA. Translation: AAH99837.1.
RefSeqiNP_001028870.1. NM_001033698.1.
UniGeneiRn.45470.

Genome annotation databases

EnsembliENSRNOT00000025011; ENSRNOP00000025011; ENSRNOG00000028168.
GeneIDi307102.
KEGGirno:307102.
UCSCiRGD:1311405. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC099837 mRNA. Translation: AAH99837.1.
RefSeqiNP_001028870.1. NM_001033698.1.
UniGeneiRn.45470.

3D structure databases

ProteinModelPortaliQ499M5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000025011.

Proteomic databases

PaxDbiQ499M5.
PRIDEiQ499M5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000025011; ENSRNOP00000025011; ENSRNOG00000028168.
GeneIDi307102.
KEGGirno:307102.
UCSCiRGD:1311405. rat.

Organism-specific databases

CTDi54522.
RGDi1311405. Ankrd16.

Phylogenomic databases

eggNOGiKOG0504. Eukaryota.
COG0666. LUCA.
GeneTreeiENSGT00840000129781.
HOGENOMiHOG000015234.
HOVERGENiHBG056770.
InParanoidiQ499M5.
OMAiHMACIGQ.
OrthoDBiEOG7N63NG.
PhylomeDBiQ499M5.

Miscellaneous databases

NextBioi656967.
PROiQ499M5.

Gene expression databases

GenevisibleiQ499M5. RN.

Family and domain databases

Gene3Di1.25.40.20. 2 hits.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
[Graphical view]
PfamiPF12796. Ank_2. 2 hits.
[Graphical view]
PRINTSiPR01415. ANKYRIN.
SMARTiSM00248. ANK. 9 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Prostate.

Entry informationi

Entry nameiANR16_RAT
AccessioniPrimary (citable) accession number: Q499M5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: September 13, 2005
Last modified: May 11, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.