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Protein
Submitted name:

Signal peptidase complex subunit 1 homolog (S. cerevisiae)

Gene

spcs1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Signal peptidase complex subunit 1 homolog (S. cerevisiae)Imported
Gene namesi
Name:spcs1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 11

Organism-specific databases

ZFINiZDB-GENE-050809-130. spcs1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 41HelicalSequence analysisAdd BLAST21
Transmembranei47 – 64HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000059298.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000076814.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4112. Eukaryota.
ENOG411274V. LUCA.
GeneTreeiENSGT00390000018321.
HOGENOMiHOG000171962.
HOVERGENiHBG086276.
KOiK12946.
OMAiDFEGQGR.
OrthoDBiEOG091G116R.
TreeFamiTF106122.

Family and domain databases

InterProiView protein in InterPro
IPR009542. SPC12.
PANTHERiPTHR13202. PTHR13202. 1 hit.
PfamiView protein in Pfam
PF06645. SPC12. 1 hit.

Sequencei

Sequence statusi: Complete.

Q499B2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSMFKSIPT HMDYKGQKLA EQIFQGIILV SAAIGFIYGL IVQQFGWTVY
60 70 80 90 100
IMLAGFTVSC LLTLPPWPMY RKSPLNWQPA LPETPAETRE KPQENQKKKK

HK
Length:102
Mass (Da):11,725
Last modified:September 13, 2005 - v1
Checksum:i997E41CDA11C6452
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR450797 Genomic DNA. No translation available.
BC099997 mRNA. Translation: AAH99997.1.
RefSeqiNP_001028274.1. NM_001033102.1.
UniGeneiDr.76357.

Genome annotation databases

EnsembliENSDART00000082379; ENSDARP00000076814; ENSDARG00000059298.
GeneIDi606666.
KEGGidre:606666.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR450797 Genomic DNA. No translation available.
BC099997 mRNA. Translation: AAH99997.1.
RefSeqiNP_001028274.1. NM_001033102.1.
UniGeneiDr.76357.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000076814.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000082379; ENSDARP00000076814; ENSDARG00000059298.
GeneIDi606666.
KEGGidre:606666.

Organism-specific databases

CTDi28972.
ZFINiZDB-GENE-050809-130. spcs1.

Phylogenomic databases

eggNOGiKOG4112. Eukaryota.
ENOG411274V. LUCA.
GeneTreeiENSGT00390000018321.
HOGENOMiHOG000171962.
HOVERGENiHBG086276.
KOiK12946.
OMAiDFEGQGR.
OrthoDBiEOG091G116R.
TreeFamiTF106122.

Miscellaneous databases

PROiQ499B2.

Gene expression databases

BgeeiENSDARG00000059298.

Family and domain databases

InterProiView protein in InterPro
IPR009542. SPC12.
PANTHERiPTHR13202. PTHR13202. 1 hit.
PfamiView protein in Pfam
PF06645. SPC12. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ499B2_DANRE
AccessioniPrimary (citable) accession number: Q499B2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: January 18, 2017
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.