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Protein
Submitted name:

Signal peptidase complex subunit 1 homolog (S. cerevisiae)

Gene

spcs1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Signal peptidase complex subunit 1 homolog (S. cerevisiae)Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:spcs1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 11

Organism-specific databases

ZFINiZDB-GENE-050809-130. spcs1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei21 – 4121HelicalSequence analysisAdd
BLAST
Transmembranei47 – 6418HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000059298.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000076814.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4112. Eukaryota.
ENOG411274V. LUCA.
GeneTreeiENSGT00390000018321.
HOGENOMiHOG000171962.
HOVERGENiHBG086276.
KOiK12946.
OMAiDFEGQGR.
OrthoDBiEOG091G116R.
PhylomeDBiQ499B2.
TreeFamiTF106122.

Family and domain databases

InterProiIPR009542. SPC12.
[Graphical view]
PANTHERiPTHR13202. PTHR13202. 1 hit.
PfamiPF06645. SPC12. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q499B2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSMFKSIPT HMDYKGQKLA EQIFQGIILV SAAIGFIYGL IVQQFGWTVY
60 70 80 90 100
IMLAGFTVSC LLTLPPWPMY RKSPLNWQPA LPETPAETRE KPQENQKKKK

HK
Length:102
Mass (Da):11,725
Last modified:September 13, 2005 - v1
Checksum:i997E41CDA11C6452
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR450797 Genomic DNA. No translation available.
BC099997 mRNA. Translation: AAH99997.1.
RefSeqiNP_001028274.1. NM_001033102.1.
UniGeneiDr.76357.

Genome annotation databases

EnsembliENSDART00000082379; ENSDARP00000076814; ENSDARG00000059298.
GeneIDi606666.
KEGGidre:606666.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR450797 Genomic DNA. No translation available.
BC099997 mRNA. Translation: AAH99997.1.
RefSeqiNP_001028274.1. NM_001033102.1.
UniGeneiDr.76357.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000076814.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000082379; ENSDARP00000076814; ENSDARG00000059298.
GeneIDi606666.
KEGGidre:606666.

Organism-specific databases

CTDi28972.
ZFINiZDB-GENE-050809-130. spcs1.

Phylogenomic databases

eggNOGiKOG4112. Eukaryota.
ENOG411274V. LUCA.
GeneTreeiENSGT00390000018321.
HOGENOMiHOG000171962.
HOVERGENiHBG086276.
KOiK12946.
OMAiDFEGQGR.
OrthoDBiEOG091G116R.
PhylomeDBiQ499B2.
TreeFamiTF106122.

Miscellaneous databases

PROiQ499B2.

Gene expression databases

BgeeiENSDARG00000059298.

Family and domain databases

InterProiIPR009542. SPC12.
[Graphical view]
PANTHERiPTHR13202. PTHR13202. 1 hit.
PfamiPF06645. SPC12. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ499B2_DANRE
AccessioniPrimary (citable) accession number: Q499B2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: September 7, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.