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Q498T0 (Q498T0_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified October 19, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Snta1 protein EMBL AAI00087.1
Gene names
Name:Snta1 EMBL AAI00087.1 RGD 1307068
OrganismRattus norvegicus (Rat) EMBL AAI00087.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length301 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Molecular functionPDZ domain binding

Inferred from physical interaction. Source: RGD

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAI00087.1

Sequences

Sequence LengthMass (Da)Tools
Q498T0 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 5EEDED08FAF051F0

FASTA30132,808
        10         20         30         40         50         60 
QPRNLNEAKH VSLKMAYVSR RCTPTDPEPR YLEICAADGQ DTLFLRAKDE ASARSWAGAI 

        70         80         90        100        110        120 
QAQISTFIPW VKDELQALLT ATGTAGSQDI KQIGWLTEQL PSGGTAPTLA LLTEKELLLY 

       130        140        150        160        170        180 
CSLPQTREAL SRPARTAPLI ATRLVHSGPS KGSVPYDAEL SFALRTGTRH GVDTHLFSVE 

       190        200        210        220        230        240 
SPQELAAWTR QLVDGCHRAA EGVQEVSTAC TWNGRPCNLS VHIDKGFTLW AAEPGATRAV 

       250        260        270        280        290        300 
LLRQPFEKLQ MSSDDGMSLL FLDFGGAEGE IQLDLHSCPK TMVFIIHSFL SAKVTRLGLL 


A

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References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Liver EMBL AAI00087.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC100086 mRNA. Translation: AAI00087.1.
IPIIPI00357951.
UniGeneRn.139656.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ498T0. 4 interactions.
STRINGQ498T0.

PTM databases

PhosphoSiteQ498T0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD1307068. Snta1.

Phylogenomic databases

eggNOGroNOG15518.
GeneTreeENSGT00550000074581.
HOVERGENHBG054204.

Gene expression databases

ArrayExpressQ498T0.
GenevestigatorQ498T0.

Family and domain databases

InterProIPR001849. Pleckstrin_homology.
IPR015482. Syntrophin.
[Graphical view]
PANTHERPTHR10554. Syntrophin. 1 hit.
SMARTSM00233. PH. 1 hit.
[Graphical view]
PROSITEPS50003. PH_DOMAIN. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ498T0_RAT
AccessionPrimary (citable) accession number: Q498T0
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: October 19, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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