Unreviewed, UniProtKB/TrEMBL Q498T0 (Q498T0_RAT)

Names and origin

Protein names

Submitted name:
    Snta1 protein EMBL AAI00087.1

Gene names

Name:

Snta1 EMBL AAI00087.1 RGD 1307068

Organism

Rattus norvegicus (Rat) EMBL AAI00087.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	301 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 2 PH domains. RuleBase RU003350V0

Ontologies

Gene Ontology (GO)
Biological process	neuromuscular junction development Inferred from electronic annotation. Source: Compara
Cellular component	postsynaptic membrane Inferred from electronic annotation. Source: Compara sarcolemma Inferred from electronic annotation. Source: Compara
Molecular function	PDZ domain binding Inferred from physical interaction. Source: RGD
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
Nos1ap	O54960	1	EBI-780251,EBI-780358
PTPRN	Q16849	1	EBI-780251,EBI-728153	From a different organism.
Ptprn	Q63259	1	EBI-780251,EBI-780223
Utrn	O55147	1	EBI-780251,EBI-780380

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAI00087.1

Sequences

	Sequence		Length	Mass (Da)
	Q498T0-1 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 5EEDED08FAF051F0	FASTA	301	32,808
	10 20 30 40 50 60 QPRNLNEAKH VSLKMAYVSR RCTPTDPEPR YLEICAADGQ DTLFLRAKDE ASARSWAGAI 70 80 90 100 110 120 QAQISTFIPW VKDELQALLT ATGTAGSQDI KQIGWLTEQL PSGGTAPTLA LLTEKELLLY 130 140 150 160 170 180 CSLPQTREAL SRPARTAPLI ATRLVHSGPS KGSVPYDAEL SFALRTGTRH GVDTHLFSVE 190 200 210 220 230 240 SPQELAAWTR QLVDGCHRAA EGVQEVSTAC TWNGRPCNLS VHIDKGFTLW AAEPGATRAV 250 260 270 280 290 300 LLRQPFEKLQ MSSDDGMSLL FLDFGGAEGE IQLDLHSCPK TMVFIIHSFL SAKVTRLGLL A

References

[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Liver EMBL AAI00087.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC100086 mRNA. Translation: AAI00087.1.
IPI	IPI00914283.
UniGene	Rn.139656
3D structure databases
SMR	Q498T0. Positions 1-66.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q498T0. 4 interactions.
STRING	Q498T0.
PTM databases
PhosphoSite	Q498T0.
Genome annotation databases
Ensembl	ENSRNOT00000021715; ENSRNOP00000021715; ENSRNOG00000016062; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q498T0.
PhylomeDB	Q498T0.
Gene expression databases
ArrayExpress	Q498T0.
Genevestigator	Q498T0.
Family and domain databases
InterPro	IPR001849. Pleckstrin_homology. IPR015482. Syntrophin. [Graphical view]
PANTHER	PTHR10554. Syntrophin. 1 hit.
Pfam	PF00169. PH. 1 hit. [Graphical view]
SMART	SM00233. PH. 1 hit. [Graphical view]
PROSITE	PS50003. PH_DOMAIN. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q498T0_RAT

Accession

Primary (citable) accession number: Q498T0

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	November 24, 2009
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)