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Protein
Submitted name:

Chromosome 6 open reading frame 4, isoform CRA_a

Gene

Traf3ip2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome 6 open reading frame 4, isoform CRA_aImported
Submitted name:
TRAF3-interacting protein 2Imported
Gene namesi
Name:Traf3ip2Imported
Synonyms:MGC112844Imported
ORF Names:rCG_19990Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi1593240. Traf3ip2.

Expressioni

Gene expression databases

BgeeiENSRNOG00000000595.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000728.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini393 – 534SEFIRInterPro annotationAdd BLAST142

Phylogenomic databases

eggNOGiENOG410IF9W. Eukaryota.
ENOG4111GTJ. LUCA.
GeneTreeiENSGT00390000007714.
HOGENOMiHOG000126819.
HOVERGENiHBG002060.
KOiK21124.
OMAiNYPSPWD.
OrthoDBiEOG091G04TE.
TreeFamiTF329063.

Family and domain databases

InterProiView protein in InterPro
IPR013568. SEFIR_dom.
PfamiView protein in Pfam
PF08357. SEFIR. 1 hit.
PROSITEiView protein in PROSITE
PS51534. SEFIR. 1 hit.

Sequencei

Sequence statusi: Complete.

Q498R8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRSIPVEVD ESEPFPSQLL NPIPESSPEE ELEPPAPNTR NTAPSSLSVL
60 70 80 90 100
QRPPLKLANH QPVSQQVTCL RAKVLEESEA SFLRRHPDLG KDVSSCSSEA
110 120 130 140 150
SEPGSELGAL SLEHRFTHME KRDRWLGPQL SAASPDTGHD SDKSDPSLPM
160 170 180 190 200
ALADSSSSDQ EMRPRPGSRP RPWPRHHRNR AAPDVPTIDT GYDSQPQDVL
210 220 230 240 250
GIRQLEKPLP LTSSCYLQDL PGPLRSKEFP QFELQRYPAN APMLPLDPSP
260 270 280 290 300
QVPWSYQYCR PGGPYHHQAP YGHGYPPAAA YQQVIQPALP EQALLGARVR
310 320 330 340 350
GLHPMQKVVL NDSSPQDQEE RPAQRDFSFS RLPRDRLCRP PSNGAGAPEE
360 370 380 390 400
SLDRPAELRP HGPQALSPAA VPRPPSNPLA RGTLKTSNLP EELRKVFITY
410 420 430 440 450
SMDTAMEVVK CVNFLLVNGF QTAIDIFEDR IRGIDIIKWM ERYLRDKTVM
460 470 480 490 500
IIVAISPKYK QDVEGTGSQL DEDEHGLHTK YIHRMMQIEF INQGSMNFRF
510 520 530 540 550
IPVLFPNAKK EHVPTWLQNT HVYSWPKNKK NILLRLLREE EYVAPPRGPL

PTLQVVPL
Length:558
Mass (Da):62,781
Last modified:September 13, 2005 - v1
Checksum:i34D204DFB5BFB62D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07045351 Genomic DNA. No translation available.
AABR07045352 Genomic DNA. No translation available.
BC100099 mRNA. Translation: AAI00100.1.
CH474051 Genomic DNA. Translation: EDL87824.1.
RefSeqiNP_001037713.1. NM_001044248.1.
XP_006256594.1. XM_006256532.3.
UniGeneiRn.9031.

Genome annotation databases

EnsembliENSRNOT00000000728; ENSRNOP00000000728; ENSRNOG00000000595.
GeneIDi361857.
KEGGirno:361857.
UCSCiRGD:1593240. rat.

Similar proteinsi

Entry informationi

Entry nameiQ498R8_RAT
AccessioniPrimary (citable) accession number: Q498R8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: February 28, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported