Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

NK-3 transcription factor, locus 1 (Drosophila)

Gene

Nkx3-1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi126 – 185HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
NK-3 transcription factor, locus 1 (Drosophila)Imported
Submitted name:
NK3 homeobox 1Imported
Gene namesi
Name:Nkx3-1Imported
ORF Names:rCG_36969Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 15

Organism-specific databases

RGDi1305369. Nkx3-1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSRNOG00000015477.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000020753.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini124 – 184HomeoboxInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Phylogenomic databases

eggNOGiKOG0842. Eukaryota.
ENOG410XR21. LUCA.
GeneTreeiENSGT00900000140771.
HOGENOMiHOG000231923.
HOVERGENiHBG006689.
KOiK09348.
OMAiQTAKQPQ.
OrthoDBiEOG091G0RNV.
TreeFamiTF315720.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
PRINTSiPR00024. HOMEOBOX.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q497B7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRVAEPQEA RLEAGGRSPW AAPPTQSKRL TSFLIQDILR DHAERRGGQP
60 70 80 90 100
STPQHQCQPD PKRDSASELD EAEGSSVTLE DPPGIRSSPT ETRAETESDA
110 120 130 140 150
HFETYLLDCE HTPVLSSAPQ VTKQPQKRSR AAFSHTQVIE LERKFSHQKY
160 170 180 190 200
LSAPERAHLA KNLKLTETQV KIWFQNRRYK TKRRQLSEDL GVLEKNSTLS
210 220 230
LPTLKDDSLS RASLVSVYAS YPYYPYLYCL GSWHPTFW
Length:238
Mass (Da):27,120
Last modified:September 13, 2005 - v1
Checksum:i26D6592E2AB20AB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC141168 Genomic DNA. No translation available.
BC100628 mRNA. Translation: AAI00629.1.
CH473951 Genomic DNA. Translation: EDM02182.1.
RefSeqiNP_001029316.1. NM_001034144.1.
UniGeneiRn.43468.

Genome annotation databases

EnsembliENSRNOT00000020753; ENSRNOP00000020753; ENSRNOG00000015477.
GeneIDi305999.
KEGGirno:305999.
UCSCiRGD:1305369. rat.

Similar proteinsi

Entry informationi

Entry nameiQ497B7_RAT
AccessioniPrimary (citable) accession number: Q497B7
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: November 22, 2017
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported