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Protein
Submitted name:

NK-3 transcription factor, locus 1 (Drosophila)

Gene

Nkx3-1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi126 – 185HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
NK-3 transcription factor, locus 1 (Drosophila)Imported
Submitted name:
NK3 homeobox 1Imported
Gene namesi
Name:Nkx3-1Imported
ORF Names:rCG_36969Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 15

Organism-specific databases

RGDi1305369 Nkx3-1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSRNOG00000015477

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000020753

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini124 – 184HomeoboxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili176 – 196Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Phylogenomic databases

eggNOGiKOG0842 Eukaryota
ENOG410XR21 LUCA
GeneTreeiENSGT00910000144003
HOGENOMiHOG000231923
HOVERGENiHBG006689
KOiK09348
OMAiQTAKQPQ
OrthoDBiEOG091G0RNV
TreeFamiTF315720

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR020479 Homeobox_metazoa
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PRINTSiPR00024 HOMEOBOX
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q497B7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRVAEPQEA RLEAGGRSPW AAPPTQSKRL TSFLIQDILR DHAERRGGQP
60 70 80 90 100
STPQHQCQPD PKRDSASELD EAEGSSVTLE DPPGIRSSPT ETRAETESDA
110 120 130 140 150
HFETYLLDCE HTPVLSSAPQ VTKQPQKRSR AAFSHTQVIE LERKFSHQKY
160 170 180 190 200
LSAPERAHLA KNLKLTETQV KIWFQNRRYK TKRRQLSEDL GVLEKNSTLS
210 220 230
LPTLKDDSLS RASLVSVYAS YPYYPYLYCL GSWHPTFW
Length:238
Mass (Da):27,120
Last modified:September 13, 2005 - v1
Checksum:i26D6592E2AB20AB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC141168 Genomic DNA No translation available.
BC100628 mRNA Translation: AAI00629.1
CH473951 Genomic DNA Translation: EDM02182.1
RefSeqiNP_001029316.1, NM_001034144.1
UniGeneiRn.43468

Genome annotation databases

EnsembliENSRNOT00000020753; ENSRNOP00000020753; ENSRNOG00000015477
GeneIDi305999
KEGGirno:305999
UCSCiRGD:1305369 rat

Similar proteinsi

Entry informationi

Entry nameiQ497B7_RAT
AccessioniPrimary (citable) accession number: Q497B7
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: March 28, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported