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Reviewed, UniProtKB/Swiss-Prot Q492E1 (SYH_BLOPB)

Last modified June 16, 2009. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Histidyl-tRNA synthetase
    EC=6.1.1.21
Alternative name(s):
    Histidine--tRNA ligase
      Short name=HisRS
Gene names
Name: hisS
Ordered Locus Names: BPEN_550
OrganismBlochmannia pennsylvanicus (strain BPEN) [Complete proteome] [HAMAP]
Taxonomic identifier291272 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeant endosymbiontsCandidatus Blochmannia

Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Catalytic activity

ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His). HAMAP MF_00127

Subunit structure

Homodimer By similarity.

Subcellular location

Cytoplasm. HAMAP MF_00127

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processhistidyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

histidine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 438438Histidyl-tRNA synthetase HAMAP MF_00127
PRO_0000136116

Sequences

Sequence LengthMass (Da)Tools
Q492E1-1 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 2FCC04C213FDB1E0

FASTA43850,693
        10         20         30         40         50         60 
MLKYDKNIQS VRGMHDYLPK DTILWQYIEN ILITILDSYG YKEIRFPIIE DTNLFKRSIG 

        70         80         90        100        110        120 
EVTDVIEKEM YNFTDRNGNN LTLRPEGTSG CVRAGIKHGL FYHQEQRLWY LGPMFRYERP 

       130        140        150        160        170        180 
QKGRYRQFHQ FSAEAFGQIG PDIDAELILI TARCWKKLGI NHHLSLELNS IGSLSSRINY 

       190        200        210        220        230        240 
RKKLITFLEK NLSNLDSNAL RRLYSNPLRI LDTKNTKTKE LLLNAPILSD YLDDDSRVHF 

       250        260        270        280        290        300 
SELCQLLNLL GVPYRVNPYL VRGLDYYNKT VFEWVTDSLG VKKTICAGGR YDELVQELGG 

       310        320        330        340        350        360 
YSAPAIGFSI GLERVILLIQ EINNISILHK NIYIDVYFIS IGDNSRKHAM LLSENIRSTL 

       370        380        390        400        410        420 
PSLRLMVHHG GDDIKKQFYC ANKHKPQIVL IMNEKNALDK TIILKNLQSK TQEILKHDAV 

       430 
SERLKHILHI TCNSTDNK 

« Hide

References

[1]"Genome sequence of Blochmannia pennsylvanicus indicates parallel evolutionary trends among bacterial mutualists of insects."
Degnan P.H., Lazarus A.B., Wernegreen J.J.
Genome Res. 15:1023-1033(2005) [PubMed: 16077009] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP000016 Genomic DNA. Translation: AAZ41160.1.
RefSeqYP_278037.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3562940.
GenomeReviewsGene locus BPEN_550 in contig CP000016_GR.
KEGGbpn:BPEN_550.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ492E1.
OMAQ492E1. VFEWVTT.

Enzyme and pathway databases

BioCycCBLO291272:BPEN_550-MON.

Family and domain databases

HAMAPMF_00127.
[Tree]
InterProIPR002314. aa-tRNA-synt_IIb_cons-reg.
IPR006195. aa-tRNA-synth_II_cons-reg.
IPR004154. Anticodon_bd.
IPR015807. His-tRNA-synth_IIa_sub.
IPR004516. His-tRNA_synth_IIA.
[Graphical view]
Gene3DG3DSA:3.40.50.800. Anticodon_bd. 1 hit.
PANTHERPTHR11476. His-tRNA_synth. 1 hit.
PfamPF03129. HGTP_anticodon. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
[Graphical view]
PIRSFPIRSF001549. His-tRNA_synth. 1 hit.
TIGRFAMsTIGR00442. hisS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYH_BLOPB
AccessionPrimary (citable) accession number: Q492E1
Entry history
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: September 13, 2005
Last modified: June 16, 2009
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents