Q48P69 (Q48P69_PSE14) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alginate lyase EMBL AAZ36046.1

Gene names

Ordered Locus Names:

PSPPH_0498

Organism

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP] EMBL AAZ36046.1

Taxonomic identifier

264730 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae pv. savastanoi

Protein attributes

Sequence length	223 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL AAZ36046.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48P69 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 63B92E5BEE093956	FASTA	223	25,224
	10 20 30 40 50 60 MIDLGSYQLS IPVGSPPKTI TTAQLVKGYD GKYFKSKSDS IVFWSPVTGT KTENAKYSRS 70 80 90 100 110 120 ELRETWSDGS LHNWVYPDAD NYLNAKLEVD QVPSSGKIVI GQIHAYESTE PLLKVEYQYK 130 140 150 160 170 180 EDTKTGDIVA KVRNRFDDDE SKVYKIVEGV KLNQTFSYVI HLSKGGKLTV SVNDTDWSKR 190 200 210 220 ISETWRDKPL YFKAGVYTQD NTGYTSEGGK ATFYNLDIDH NKS

References

[1]

"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition." Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. J. Bacteriol. 187:6488-6498(2005) [PubMed: 16159782] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000058 Genomic DNA. Translation: AAZ36046.1.
RefSeq	YP_272800.1. NC_005773.3.
3D structure databases
ProteinModelPortal	Q48P69.
ModBase	Search...
Protein family/group databases
CAZy	PL7. Polysaccharide Lyase Family 7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3558653.
GenomeReviews	Gene locus PSPPH_0498 in contig CP000058_GR.
KEGG	psp:PSPPH_0498.
NMPDR	fig|264730.3.peg.361.
PATRIC	19970034. VBIPseSyr78478_0542.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG638857.
OMA	NTGYTSE.
ProtClustDB	CLSK866376.
Family and domain databases
InterPro	IPR014895. Alginate_lyase_2. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
Pfam	PF08787. Alginate_lyase2. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q48P69_PSE14

Accession

Primary (citable) accession number: Q48P69

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)