Q48N62 (Q48N62_PSE14) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectate lyase L, putative EMBL AAZ34634.1

Gene names

Ordered Locus Names:

PSPPH_0883

Organism

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP] EMBL AAZ34634.1

Taxonomic identifier

264730 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae pv. savastanoi

Protein attributes

Sequence length	374 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL AAZ34634.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48N62 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 1559C527561252C5	FASTA	374	40,727
	10 20 30 40 50 60 MQQTRIRLRD AGRKSWRHGV YAYTAGINSC ATRTDTVNAI TLNNSGSENK PIRYWAYPGE 70 80 90 100 110 120 TPVFDFSAMK DDCRVKGFNV TGSWLHLKGL EVTGVPQQPD NHLNHESWGI WNSGSHNTFE 130 140 150 160 170 180 QLNLHHNMGP GLFIQNGGYN LVLNTDSHHN YDPYTSNGAG QSADGFGAHI KAGHPGNVFR 190 200 210 220 230 240 GCRAWANSDD GFDLINAFSP VTIENSWAWQ QGYLPGTHTK LEAGNGNGIK AGGYGGKYVP 250 260 270 280 290 300 NGVKHIVRNS VAFDNKSAGF YANHHTLALD FINNTAFSNG ANYNMAGIAP DGSLIPLSHL 310 320 330 340 350 360 LNNIAYKGRL IVNSEGLDMA HNSWALQTPV TDADFEDVSD IGWDAKRQPD GSLPVLSSFH 370 LRPGSRLAGM GAFN

References

[1]

"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition." Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. J. Bacteriol. 187:6488-6498(2005) [PubMed: 16159782] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000058 Genomic DNA. Translation: AAZ34634.1.
RefSeq	YP_273159.1. NC_005773.3.
3D structure databases
ProteinModelPortal	Q48N62.
ModBase	Search...
Protein-protein interaction databases
STRING	Q48N62.
Protein family/group databases
CAZy	PL9. Polysaccharide Lyase Family 9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3557192.
GenomeReviews	Gene locus PSPPH_0883 in contig CP000058_GR.
KEGG	psp:PSPPH_0883.
NMPDR	fig|264730.3.peg.792.
PATRIC	19970845. VBIPseSyr78478_0931.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG08018.
HOGENOM	HBG584769.
OMA	DSHHNYD.
ProtClustDB	CLSK412066.
Family and domain databases
InterPro	IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
SMART	SM00710. PbH1. 4 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q48N62_PSE14

Accession

Primary (citable) accession number: Q48N62

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)