Q48M78 (Q48M78_PSE14) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sensory box-containing diguanylate cyclase, putative EMBL AAZ36284.1

Gene names

Ordered Locus Names:

PSPPH_1229

Organism

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP] EMBL AAZ36284.1

Taxonomic identifier

264730 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae pv. savastanoi

Protein attributes

Sequence length	459 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48M78 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 2A91472BA98D66D5	FASTA	459	50,561
	10 20 30 40 50 60 MRSNSLHLLP ARHRVTHHLI RAAINSTDHS TGHQMTSSSQ RLALLEAVVE QSFNAVLITD 70 80 90 100 110 120 ANLTNGGPFI VYVNPAFCAM TGYAAEALIG LSPRILQGPD TDRQVIERMR QCLSESLFFE 130 140 150 160 170 180 GSTVNYRADG SPYVVEWKIS PVRDDAGAVC NFVSVQQNIS PRIRAEREQH LLAQALNAAL 190 200 210 220 230 240 DPIMITDCNA TIVFANEAFQ HITGYSASEI IGENPRVLSS GKHDEMFYAQ FNEALASGTP 250 260 270 280 290 300 FRTTFINKRK DGSLFYAEHS ISPLCNLEGT ITHYVSISQD VTTRLGREQK LLEIAHSDPL 310 320 330 340 350 360 TGLNNRRAAE HTLERLIDTA RISGKPFSLI IGDIDHFKSV NDRYGHPAGD RVLTSVAVIL 370 380 390 400 410 420 KQRIRLQDVA ARWGGEEFLI LVPDSSLDHA AELADRIRKG VEDLLIPNTG SVTISLGVAQ 430 440 450 LSPGETAASL IQRADKALYQ AKRRGRNRVD IAQADDTIY

References

[1]

"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition." Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. J. Bacteriol. 187:6488-6498(2005) [PubMed: 16159782] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000058 Genomic DNA. Translation: AAZ36284.1.
RefSeq	YP_273494.1. NC_005773.3.
3D structure databases
ProteinModelPortal	Q48M78.
ModBase	Search...
Protein-protein interaction databases
STRING	Q48M78.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3558900.
GenomeReviews	Gene locus PSPPH_1229 in contig CP000058_GR.
KEGG	psp:PSPPH_1229.
NMPDR	fig|264730.3.peg.972.
PATRIC	19971565. VBIPseSyr78478_1289.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2202.
HOGENOM	HBG335428.
OMA	VFANEAF.
PhylomeDB	Q48M78.
ProtClustDB	CLSK582163.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013767. PAS_fold. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF00989. PAS. 2 hits. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. SM00086. PAC. 2 hits. SM00091. PAS. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 2 hits.
PROSITE	PS50887. GGDEF. 1 hit. PS50113. PAC. 2 hits. PS50112. PAS. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q48M78_PSE14

Accession

Primary (citable) accession number: Q48M78

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)