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Protein
Submitted name:

Type III outer membrane protein HrcC

Gene

hrcC

Organism
Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) (Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Type III outer membrane protein HrcCImported
Gene namesi
Name:hrcCImported
Ordered Locus Names:PSPPH_1280Imported
OrganismiPseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) (Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6))Imported
Taxonomic identifieri264730 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000551 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500423482822 – 699Sequence analysisAdd BLAST678

Interactioni

Protein-protein interaction databases

STRINGi264730.PSPPH_1280.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 318Secretin_NInterPro annotationAdd BLAST144

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000270092.
KOiK03219.
OMAiNAVIVHD.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q48M33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKALMWLPL LLIGLTPVTW AVTPEAWKHT AYAYDARQTE LTTALADFAK
60 70 80 90 100
EFGMALDMPS IPGTLDGRIR AQSPEEFLDR LGQEYHFQWF VYNDTLYVSP
110 120 130 140 150
SSEHTSARVE VSSDAVDDLQ TALTDVGLLD KRFGWGVLPN EGVVLVRGPA
160 170 180 190 200
KYVELVRDYS KKVETPEKGD KQDIVVFPLK YANASDRTIR YRDQQLTVAG
210 220 230 240 250
VASILQDLLD TRSRGEAING INLLGHGGAN AGLAGGDADT QSLPLDSSGI
260 270 280 290 300
DTGALQQGLD RVLSYGSGSK KSGKSRSGGR ANIRVTADVR NNAVLIYDLP
310 320 330 340 350
SRKPMYEKLI KELDVSRNLI EIDAVILDID RNELAELSSR WNFNAGSVGG
360 370 380 390 400
GVNLFDAGTS STMFIQNAGK FSSELHALEG NGSASVIGNP SILTLENQPA
410 420 430 440 450
VIDFSRTEYI TATSERVANI EPITAGTSLQ VIPRSLDHDG KPQVQLIVDI
460 470 480 490 500
EDGQIDISDI NDTQPSVRKG NVSTQAVIAE HGSLVIGGFH GLEANDKVHK
510 520 530 540 550
IPLLGDIPYI GKLLFQSRSR ELSQRERLFI LTPRLIGDQV NPARYVQNGN
560 570 580 590 600
PHDVDDQMKR IKERRDGGEL PTRGDVQKVF TQMVDGTAPV GMRTGETLPF
610 620 630 640 650
ETDSLCDPGA GLTLDGQRSQ WYARKDWGVA VVVAHNNTDK PVRIDESRCG
660 670 680 690
GRWVIGVAAW PHAWLQPGEE SEVYIAVRQP QISKMAKESR PSLLKGAKP
Length:699
Mass (Da):76,441
Last modified:September 13, 2005 - v1
Checksum:i73D9F6FEE06202B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000058 Genomic DNA. Translation: AAZ37208.1.
RefSeqiWP_004656220.1. NC_005773.3.

Genome annotation databases

EnsemblBacteriaiAAZ37208; AAZ37208; PSPPH_1280.
KEGGipsp:PSPPH_1280.
PATRICi19971681. VBIPseSyr78478_1347.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000058 Genomic DNA. Translation: AAZ37208.1.
RefSeqiWP_004656220.1. NC_005773.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi264730.PSPPH_1280.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ37208; AAZ37208; PSPPH_1280.
KEGGipsp:PSPPH_1280.
PATRICi19971681. VBIPseSyr78478_1347.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000270092.
KOiK03219.
OMAiNAVIVHD.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ48M33_PSE14
AccessioniPrimary (citable) accession number: Q48M33
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: November 2, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.