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Q48L76 (Q48L76_PSE14) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
   Molecular functionIsomerase RuleBase RU003886
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpseudouridine synthesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

pseudouridine synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q48L76 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 9968E775B4FCBDBE

FASTA23726,915
        10         20         30         40         50         60 
MRRYRRTSQE AAPLPPLAFL VFRGRCMPLS NIRIIYQDAA VLVIDKPTLL LSVPGRADDN 

        70         80         90        100        110        120 
KDCLITRLQE NGFPEARIVH RLDWETSGII LLARDADTHR ELSRQFHDRE TEKAYTALCW 

       130        140        150        160        170        180 
GQPSLDSGSI DLPLRYDPPT KPRHVVDHEG GKHALTFWKV VERHDTYCRV ELTPITGRSH 

       190        200        210        220        230 
QLRVHMLSIG HPLLGDGLYA HPEALAAYPR LCLHASMLSF THPGTGERLT FECPAPF

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References

[1]"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition."
Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., Deboy R., Durkin A.S., Giglio M.G., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S., Crabtree J., Creasy T., Davidsen T., Haft D.H. expand/collapse author list , Zafar N., Zhou L., Halpin R., Holley T., Khouri H., Feldblyum T., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D.J., Mansfield J., Collmer A., Buell C.R.
J. Bacteriol. 187:6488-6498(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1448A / Race 6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000058 Genomic DNA. Translation: AAZ36874.1.
RefSeqYP_273849.1. NC_005773.3.

3D structure databases

ProteinModelPortalQ48L76.
SMRQ48L76. Positions 31-237.
ModBaseSearch...

Protein-protein interaction databases

STRING264730.PSPPH_1603.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ36874; AAZ36874; PSPPH_1603.
GeneID3559504.
KEGGpsp:PSPPH_1603.
PATRIC19972367. VBIPseSyr78478_1686.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0564.
HOGENOMHOG000275919.
KOK06177.
OMAIDLPLRY.
ProtClustDBCLSK867848.

Family and domain databases

InterProIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMSSF55120. PsdUridine_synth_cat_dom. 1 hit.
PROSITEPS01129. PSI_RLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ48L76_PSE14
AccessionPrimary (citable) accession number: Q48L76
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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