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Q48L42 (Q48L42_PSE14) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length312 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Malonyl-CoA + [acyl-carrier-protein] = CoA + malonyl-[acyl-carrier-protein]. PIRNR PIRNR000446

Sequence similarities

Belongs to the fabD family. PIRNR PIRNR000446

Sequences

Sequence LengthMass (Da)Tools
Q48L42 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 299FD1AC0F67FFF2

FASTA31232,517
        10         20         30         40         50         60 
MSASLAFVFP GQGSQSLGML AEQGAQHPLI LDTFEQASEA LDYDLWALTQ SGPVELLNQT 

        70         80         90        100        110        120 
DKTQPAILTA SIALWHVWLA EGGAVPAFVA GHSLGEYSAL VAAQSLSLAD AVKLVECRGQ 

       130        140        150        160        170        180 
LMQEAVPAGQ GGMAAILGLD DADVIAACAE AAQGEVVSAV NFNSPGQVVI AGSAEAVKRA 

       190        200        210        220        230        240 
MELCKARGAK RALSLPVSVP SHCELMRPAA ERFAEAVEAI EWQAPEIALV QNVSASAVSD 

       250        260        270        280        290        300 
LATLKRDLLE QLYKPVRWVE SIQCLASRGA TQLVECGPGK VLAGLNKRCA EGVITYNLDT 

       310 
PDAFAAARAA LA

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References

[1]"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition."
Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., Deboy R., Durkin A.S., Giglio M.G., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S., Crabtree J., Creasy T., Davidsen T., Haft D.H. expand/collapse author list , Zafar N., Zhou L., Halpin R., Holley T., Khouri H., Feldblyum T., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D.J., Mansfield J., Collmer A., Buell C.R.
J. Bacteriol. 187:6488-6498(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1448A / Race 6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000058 Genomic DNA. Translation: AAZ36028.1.
RefSeqYP_273883.1. NC_005773.3.

3D structure databases

ProteinModelPortalQ48L42.
SMRQ48L42. Positions 5-307.
ModBaseSearch...

Protein-protein interaction databases

STRING264730.PSPPH_1640.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ36028; AAZ36028; PSPPH_1640.
GeneID3558634.
KEGGpsp:PSPPH_1640.
PATRIC19972450. VBIPseSyr78478_1727.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0331.
HOGENOMHOG000036503.
KOK00645.
OMAEVSGPFH.
ProtClustDBCLSK867663.

Family and domain databases

Gene3D3.40.366.10. 2 hits.
InterProIPR001227. Ac_transferase_dom.
IPR014043. Acyl_transferase.
IPR016035. Acyl_Trfase/lysoPLipase.
IPR024925. Malonyl_CoA-ACP_transAc.
IPR004410. Malonyl_CoA-ACP_transAc_FabD.
IPR016036. Malonyl_transacylase_ACP-bd.
[Graphical view]
PfamPF00698. Acyl_transf_1. 1 hit.
[Graphical view]
PIRSFPIRSF000446. Mct. 1 hit.
SUPFAMSSF52151. Acyl_Trfase/lysoPlipase. 1 hit.
SSF55048. Malonyl_transacylase_ACP-bd. 1 hit.
TIGRFAMsTIGR00128. fabD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ48L42_PSE14
AccessionPrimary (citable) accession number: Q48L42
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 1, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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