Q48KS2 (Q48KS2_PSE14) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase family protein EMBL AAZ37867.1

Gene names

Ordered Locus Names:

PSPPH_1769

Organism

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP] EMBL AAZ37867.1

Taxonomic identifier

264730 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae pv. savastanoi

Protein attributes

Sequence length	309 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48KS2 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 3190CE783C2388B8	FASTA	309	35,786
	10 20 30 40 50 60 MSADYPRDLI GYGNNPPHPR WPGNARIALS FVLNYEEGGE RNILHGDKES EAFLSEMVAA 70 80 90 100 110 120 QPLQGQRNMS MESLYEYGSR AGVWRILRLF KQFDIPLTIF AVAMAAQRHP EVIRAMVADG 130 140 150 160 170 180 HEICSHGYRW IDYQNMEEAD EREHMRQAIQ ILTEISGERP LGWYTGRTGP NTRRLVMEEG 190 200 210 220 230 240 GFLYDCDTYD DDLPYWEPNN PTGKPHLVIP YTLDTNDMRF TQVQGFNNGE QFFQYLKDAF 250 260 270 280 290 300 DVLYAEGEDA PKMLSIGLHC RLIGRPARLA ALKRFIEYVK GHEQVWFTRR VDIARHWHTE HPFTGKAEQ

References

[1]

"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition." Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. J. Bacteriol. 187:6488-6498(2005) [PubMed: 16159782] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000058 Genomic DNA. Translation: AAZ37867.1.
RefSeq	YP_274003.1. NC_005773.3.
3D structure databases
ProteinModelPortal	Q48KS2.
SMR	Q48KS2. Positions 4-303.
ModBase	Search...
Protein-protein interaction databases
STRING	Q48KS2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3560537.
GenomeReviews	Gene locus PSPPH_1769 in contig CP000058_GR.
KEGG	psp:PSPPH_1769.
NMPDR	fig|264730.3.peg.1875.
PATRIC	19972719. VBIPseSyr78478_1855.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0726.
HOGENOM	HBG367725.
OMA	DLPYWEP.
ProtClustDB	CLSK866619.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR002509. Polysac_deacetylase. IPR017625. Urate_catabol_UraD_N. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03212. UraD_N-term-dom. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q48KS2_PSE14

Accession

Primary (citable) accession number: Q48KS2

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)