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Q48JG9 (GLGA_PSE14) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:PSPPH_2248
OrganismPseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP]
Taxonomic identifier264730 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 485485Glycogen synthase HAMAP-Rule MF_00484
PRO_0000230258

Sites

Binding site211ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q48JG9 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: CC5CD929B3136996

FASTA48553,484
        10         20         30         40         50         60 
MSQVSRRKVL FVTSELADLV KTGGLGDVSA ALPRAMRHLH DVRVLIPGYP QVINSGNPIH 

        70         80         90        100        110        120 
IISQLGGHAA LPPCKVGRMD MKDGLVIYVL ICPELYEREG TPYADSDGRD WSDNHIRFAR 

       130        140        150        160        170        180 
LGLAAAEFAA GEVKSQWCPE LVHAHDWPAG LAPAYMRWRG QSTPSIFTIH NLAYQGTVST 

       190        200        210        220        230        240 
ASSRELGIPD EAITPEGMEF YGKLSFIKAG MAFASHITTV SATYAREITT PEFGCGLEGF 

       250        260        270        280        290        300 
LQSKANKGQL SGIPNGIDES WDAATDEHLI CHFAPNEWTR KEINADYVRE LFELDASTGP 

       310        320        330        340        350        360 
LYAVVSRLVY QKGLDLTIGV AEHIVNNGGQ IAIIGRGEPE EEDAMRELAA RFPGRIGVRI 

       370        380        390        400        410        420 
GFNETDARRM FAGSDFLLMP SRYEPCGLSQ MYAQRFGSLP VARNTGGLAD TIEDGVTGFL 

       430        440        450        460        470        480 
FKESTIESYT EALNRTFQVF AHRELLNAMR CRAMAAPFNW HQAVEPYADL YRDLLKKNVS 


ISSNY 

« Hide

References

[1]"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition."
Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. expand/collapse author list , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R.
J. Bacteriol. 187:6488-6498(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1448A / Race 6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000058 Genomic DNA. Translation: AAZ35317.1.
RefSeqYP_274459.1. NC_005773.3.

3D structure databases

ProteinModelPortalQ48JG9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING264730.PSPPH_2248.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ35317; AAZ35317; PSPPH_2248.
GeneID3557897.
KEGGpsp:PSPPH_2248.
PATRIC19973738. VBIPseSyr78478_2356.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycPSAV264730:GKDE-2251-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PSE14
AccessionPrimary (citable) accession number: Q48JG9
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: September 13, 2005
Last modified: February 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways