Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q48IE2

- GLGB_PSE14

UniProt

Q48IE2 - GLGB_PSE14

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei420 – 4201NucleophileUniRule annotation
Active sitei473 – 4731Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciPSAV264730:GKDE-2651-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:PSPPH_2648
OrganismiPseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)
Taxonomic identifieri264730 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000551: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7417411,4-alpha-glucan branching enzyme GlgBPRO_0000260679Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi264730.PSPPH_2648.

Structurei

3D structure databases

ProteinModelPortaliQ48IE2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q48IE2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNAPHKTGTG RRAIPAAVDI DALIRAEHRD PFSILGPHGD GGSGQYVRAY
60 70 80 90 100
LPAALSVRLL AKDDGRELGE MEMSEVPGFF VGHLEQPQPY LLKVQWAGGE
110 120 130 140 150
QITEDPYSFG PLLGEMDLYL FAEGNHRDLS SCLGAQVTKV DGVDGVRFAV
160 170 180 190 200
WAPNARRVSV VGSFNSWDGR RHPMRLRHPT GVWEIFVPRL QPGEVYKYEI
210 220 230 240 250
LGAHGILPLK SDPMALATTL PPDTASKVSA PLQFEWNDQE WLRSRTGRHD
260 270 280 290 300
VAAPLSIYEL HAGSWQMEQH EDGQWRQYNW RELADRLIPY VKELGFTHIE
310 320 330 340 350
LMPIMEHPFG GSWGYQLLAQ FAPTARYGSP EDFAAFVDAC HRAEIGVILD
360 370 380 390 400
WVPAHFPTDT HGLAQFDGTA LYEYADPKEG FHQDWNTLIY NLGRTEVHGF
410 420 430 440 450
MLASALHWLK HYHIDGLRVD AVASMLYRDY SRNAGEWVPN RFGGRENIET
460 470 480 490 500
IDFLRHLNDV VALEAPGTMV IAEESTAWPG VSEPTQQGGL GFNYKWNMGW
510 520 530 540 550
MHDSLQYMMR DPLHRRHHHS TLTFGLVYAW SERFVLPISH DEVVHGKHSL
560 570 580 590 600
IDKMPGDRWQ KFANLRAYLS FMWTHPGKKL LFMGCEFGQW REWNHDEQLD
610 620 630 640 650
WYLMQYADHV GVKNLVGDLN RLYRQEKALH QRDADPAGFQ WLIGDDQANS
660 670 680 690 700
VFAYLRWSND GEPLLVVANM TPVPRLAYRV GAPVSGAWTE LLNSDAETYA
710 720 730 740
GSNMGNGGEV NTEDEPAHGM EASLKLNLPP LAVLILKPKK D
Length:741
Mass (Da):83,856
Last modified:September 13, 2005 - v1
Checksum:iEF4650EBADF4BD54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000058 Genomic DNA. Translation: AAZ33678.1.
RefSeqiYP_274839.1. NC_005773.3.

Genome annotation databases

EnsemblBacteriaiAAZ33678; AAZ33678; PSPPH_2648.
GeneIDi3556214.
KEGGipsp:PSPPH_2648.
PATRICi19974605. VBIPseSyr78478_2785.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000058 Genomic DNA. Translation: AAZ33678.1 .
RefSeqi YP_274839.1. NC_005773.3.

3D structure databases

ProteinModelPortali Q48IE2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 264730.PSPPH_2648.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ33678 ; AAZ33678 ; PSPPH_2648 .
GeneIDi 3556214.
KEGGi psp:PSPPH_2648.
PATRICi 19974605. VBIPseSyr78478_2785.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci PSAV264730:GKDE-2651-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1448A / Race 6.

Entry informationi

Entry nameiGLGB_PSE14
AccessioniPrimary (citable) accession number: Q48IE2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: September 13, 2005
Last modified: October 1, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3