Q48GU6 (Q48GU6_PSE14) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 5 EMBL AAZ33385.1

Gene names

Ordered Locus Names:

PSPPH_3227

Organism

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP] EMBL AAZ33385.1

Taxonomic identifier

264730 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae pv. savastanoi

Protein attributes

Sequence length	437 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL AAZ33385.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48GU6 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: DAF90272B58F283E	FASTA	437	48,558
	10 20 30 40 50 60 MQRPSRFRQI VASALLSAAM CSATQAATVL KAPREVVWAD FLGVNVQFQY FAPDIYQQQM 70 80 90 100 110 120 SRLDELGLNW VRLTIHWPVI EPQKDHYALT ELDAAMAAIK AHSYNTVAYL VGSAPFASSA 130 140 150 160 170 180 PAGAKSRDQY PPTDFNVFAA RMTALAQRYP QVNNWQVWNE PNIVWLPKED PTAYGRLLTT 190 200 210 220 230 240 TASAIRAALP DKTIVTAGMA YYSQMHSTSG YMMQALLDNG LGQQNIVAAY HPYSEYPEGD 250 260 270 280 290 300 SLPDRDFLVR ANAMNQLLHS NGVKQVWATE WGWSSYAGPV EMQHLIGTSG QADYTLRRLA 310 320 330 340 350 360 LMSAMDFQRI FLFNLSDLDE RASARDQGYG LLDLQASPKP VYTALQNFLK ITGPRLQPAE 370 380 390 400 410 420 PPAVSRVPDD LYAVPWTRDD GTHLLMFWSA TGTSLNFPNI TDAVVHDPLS GSRTPLSASQ 430 GVTLLLKPTL QILEWKP

References

[1]

"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition." Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. J. Bacteriol. 187:6488-6498(2005) [PubMed: 16159782] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000058 Genomic DNA. Translation: AAZ33385.1.
RefSeq	YP_275387.1. NC_005773.3.
3D structure databases
ProteinModelPortal	Q48GU6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q48GU6.
Protein family/group databases
CAZy	GH39. Glycoside Hydrolase Family 39.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3555909.
GenomeReviews	Gene locus PSPPH_3227 in contig CP000058_GR.
KEGG	psp:PSPPH_3227.
NMPDR	fig|264730.3.peg.3217.
PATRIC	19975844. VBIPseSyr78478_3394.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3664.
HOGENOM	HBG638725.
OMA	TAGMAYY.
ProtClustDB	CLSK867109.
Family and domain databases
InterPro	IPR001547. Glyco_hydro_5. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00150. Cellulase. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q48GU6_PSE14

Accession

Primary (citable) accession number: Q48GU6

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)