Q48F57 (GLND_PSE14) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:	glnD
Ordered Locus Names:	PSPPH_3842

Organism

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP]

Taxonomic identifier

264730 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae group › Pseudomonas syringae group genomosp. 2 › Pseudomonas syringae pv. savastanoi › Pseudomonas syringae pv. phaseolicola

Protein attributes

Sequence length	898 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.

Ontologies

Keywords
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: EC amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 898	898	[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277		PRO_0000231687

Sequences

	Sequence		Length	Mass (Da)
	Q48F57 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 0F0D33C6388E4BD4	FASTA	898	102,672
	10 20 30 40 50 60 MPQVDPDLFD RGQFQAELAL KASPIAAFKK AIRRAKDVLD DRFKSGRDIR RLIEDRAWFV 70 80 90 100 110 120 DNILQKAWDQ FEWSEDADIA LLAVGGYGRG ELHPYSDIDL LILLDSDDHE VFREPIERFL 130 140 150 160 170 180 TLLWDIGLEV GQSVRSVNEC AQEGRADLTV ITNLMESRTI AGPEHLRQRM LEVTSTEHMW 190 200 210 220 230 240 PSKEFFLAKH AEQKKRHHKY NDTEYNLEPN VKGSPGGLRD IQTILWVARR QYGTLNLHAL 250 260 270 280 290 300 AGEGFLLGSE NALLASSQEF LWKVRYALHM LAGRSEDRLL FDYQVRIAGL LGYEDSDAKL 310 320 330 340 350 360 AIERFMQKYY RVVMSIAELS DLIIQHFEEV ILSDDSGTAQ PINSRFQLHD GYIEATNPNV 370 380 390 400 410 420 FKRTPFAMIE IFVLMAQHPE IKGVRADTIR LLREHRHLIN DDFRNDIRNT SLFIELFKCE 430 440 450 460 470 480 TGIHRNLRRM NRYGILGLYL PEFGHIVGQM QHDLFHIYTV DAHTLNLIKH LRKLQYTEVS 490 500 510 520 530 540 EKFPLASKIM ARLPKPELIY LAGLYHDIGK GRGGDHSELG AIDAQAFGTR HHLPDWDTRL 550 560 570 580 590 600 IVWLVSNHLV MSTTAQRKDL SDPQVIHDFA QFVGDEVHLD YLYVLTVADI NATNPTLWNS 610 620 630 640 650 660 WRASLLRQLY TETKRALRRG LENPVDREEQ IRRTQTAALD ILVRNGTDPD DVEQLWSALG 670 680 690 700 710 720 DDYFLRHTAG DVAWHSDAIL QQPADGGPLV LIKETTQREF EGGTQIFIYA PDQHDFFAVT 730 740 750 760 770 780 VAAMDQLNLN IHDARIITSS SKFTLDTYIV LDNEGGSIGD NPERVQEIRN GLTEALRNPD 790 800 810 820 830 840 DYPTIIKRRV PRQLKHFAFA PQVTIHNDAQ RPVTVLELLA PDRPGLLARI GKIFLEFDLS 850 860 870 880 890 LQNAKIATLG ERVEDVFFIT DANNHPLSDP QLCSQLQDAI VKQLSVNSEP GHDLRISI

References

[1]

"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition." Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. J. Bacteriol. 187:6488-6498(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 1448A / Race 6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000058 Genomic DNA. Translation: AAZ35473.1.
RefSeq	YP_275980.1. NC_005773.3.
3D structure databases
ProteinModelPortal	Q48F57.
ModBase	Search...
Protein-protein interaction databases
STRING	264730.PSPPH_3842.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ35473; AAZ35473; PSPPH_3842.
GeneID	3558061.
KEGG	psp:PSPPH_3842.
PATRIC	19977127. VBIPseSyr78478_4024.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HOG000261778.
KO	K00990.
OMA	SPKVWNA.
ProtClustDB	PRK00275.
Enzyme and pathway databases
BioCyc	PSAV264730:GKDE-3845-MONOMER.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR002912. ACT_dom. IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF01842. ACT. 1 hit. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_PSE14

Accession

Primary (citable) accession number: Q48F57

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	September 13, 2005
Last modified:	May 29, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program