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Protein

Superoxide dismutase

Gene

sodB

Organism
Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) (Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6))
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi74Divalent metal cationUniRule annotation1
Metal bindingi157Divalent metal cationUniRule annotation1
Metal bindingi161Divalent metal cationUniRule annotation1

GO - Molecular functioni

  • metal ion binding Source: UniProtKB-KW
  • superoxide dismutase activity Source: JCVI

GO - Biological processi

  • removal of superoxide radicals Source: JCVI

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:PSPPH_4064Imported
OrganismiPseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) (Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6))Imported
Taxonomic identifieri264730 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000551 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264730.PSPPH_4064

Structurei

3D structure databases

ProteinModelPortaliQ48EJ8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 82Sod_Fe_NInterPro annotationAdd BLAST80
Domaini89 – 189Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiFGTGWVW

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

Q48EJ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFELPPLPY AKDALVPHIS AETLEYHHDK HHNTYVVNLN NLVPGTEFEG
60 70 80 90 100
KTLEEIIKTS SGGIFNNAAQ VWNHTFYWEC LAPNAGGEPT GALAEAINTA
110 120 130 140 150
FGSFDKFKEE FSKTSIGTFG SGWGWLVKKA DGSLALASTI GAGNPLTSGD
160 170 180 190
TPLLTCDVWE HAYYIDYRNL RPKYVEAFWN LVNWDFVAKQ FEA
Length:193
Mass (Da):21,422
Last modified:September 13, 2005 - v1
Checksum:iE4236F9652FDE53D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000058 Genomic DNA Translation: AAZ35309.1
RefSeqiWP_002555007.1, NC_005773.3

Genome annotation databases

EnsemblBacteriaiAAZ35309; AAZ35309; PSPPH_4064
KEGGipsp:PSPPH_4064

Similar proteinsi

Entry informationi

Entry nameiQ48EJ8_PSE14
AccessioniPrimary (citable) accession number: Q48EJ8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: March 28, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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