Q48C46 (Q48C46_PSE14) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Prophage PSPPH06, putative lysozyme EMBL AAZ36419.1

Gene names

Ordered Locus Names:

PSPPH_4961

Organism

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [Complete proteome] [HAMAP] EMBL AAZ36419.1

Taxonomic identifier

264730 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae pv. savastanoi

Protein attributes

Sequence length	175 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	provirus Traceable author statement Ref.1. Source: JCVI
Molecular function	lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48C46 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 5D176C617406D82E	FASTA	175	18,536
	10 20 30 40 50 60 MSLRVKITAG FLLLCSGTLT AFLGTWEGNG QNVVYADRLA GGLPTVCKGI TRHTSPDPVV 70 80 90 100 110 120 VGEYWSDARC AEVEGLVIAK GQLSLADCLT NQAIGQNTFD ALSSHGHNFG VPTTCASRAV 130 140 150 160 170 GLINAGRIAD GCRALAWASD GTTPVWAYVT GADGRKTFVR GLHNRRLAEM RLCLQ

References

[1]

"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition." Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H. , Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. J. Bacteriol. 187:6488-6498(2005) [PubMed: 16159782] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000058 Genomic DNA. Translation: AAZ36419.1.
RefSeq	YP_277047.1. NC_005773.3.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q48C46.
Protein family/group databases
CAZy	GH24. Glycoside Hydrolase Family 24.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3559039.
GenomeReviews	Gene locus PSPPH_4961 in contig CP000058_GR.
KEGG	psp:PSPPH_4961.
NMPDR	fig|264730.3.peg.4679.
PATRIC	19979456. VBIPseSyr78478_5171.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG75136.
HOGENOM	HBG756417.
OMA	LRNRRLD.
ProtClustDB	CLSK410454.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR023347. Lysozyme_dom. [Graphical view]
Gene3D	G3DSA:1.10.530.40. G3DSA:1.10.530.40. 1 hit.
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q48C46_PSE14

Accession

Primary (citable) accession number: Q48C46

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)