Q48A25 (Q48A25_COLP3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
N-acetylmuramoyl-L-alanine amidase EMBL AAZ25558.1
EC=3.5.1.28 EMBL AAZ25558.1

Gene names

Name:	amiB EMBL AAZ25558.1
Ordered Locus Names:	CPS_0322

Organism

Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) [Complete proteome] [HAMAP] EMBL AAZ25558.1

Taxonomic identifier

167879 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Colwelliaceae › Colwellia

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL AAZ25558.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48A25 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 4BAF00D9199C9346	FASTA	443	49,017
	10 20 30 40 50 60 MYRRILLSIA RLRALSFLCV AVLSLLSVNT YAANSIDGIR VWPAPENTRI VFDVKKKPDY 70 80 90 100 110 120 KFFTLSKPNR LVIDFTNTKN TVALKNLAVN DPRVKLFRSS VNKGKTRLVL ELTKSYQLTV 130 140 150 160 170 180 FPLAPAGQYG HRLVIDLYDK NRSKKNVSKP KKSVGDIIIG IDAGHGGEDP GSIGGKGTYE 190 200 210 220 230 240 KRVTLAIAKK LQKVINKEKG MKAVMIRSGD YYVNLNRRTS LARDKHVDFL VSIHADAFHT 250 260 270 280 290 300 PGPSGASVWV VTKSRAESEL SRWLVNREKK SELLGGGGGV IKNTSDSHLA LALADMSKEH 310 320 330 340 350 360 SLGVSFGVAN NVIKELKKIT KMHKSTPQNG NFAVLKSSDI PSILVETGFI SNHKEEKNLT 370 380 390 400 410 420 WSKHQQRLAN AIHGGIKKHF LAHPLTGSYF ASVGYKKHKV RSGESLSVLA KRYNISMSKL 430 440 KSINKLKTNS LRIGQTLKIP RTG

References

[1]

"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses." Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M. , Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M. Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) [PubMed: 16043709] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000083 Genomic DNA. Translation: AAZ25558.1.
RefSeq	YP_267088.1. NC_003910.7.
3D structure databases
ProteinModelPortal	Q48A25.
ModBase	Search...
Protein-protein interaction databases
STRING	Q48A25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3519800.
GenomeReviews	Gene locus CPS_0322 in contig CP000083_GR.
KEGG	cps:CPS_0322.
NMPDR	fig|167879.3.peg.180.
PATRIC	21464031. VBIColPsy94388_0286.
TIGR	CPS_0322.
Phylogenomic databases
eggNOG	COG0860.
HOGENOM	HBG656726.
OMA	VWPAEDY.
Family and domain databases
InterPro	IPR021731. AMIN. IPR002508. CW_Hdrlase/autolysin_cat. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
Gene3D	G3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KO	K01448.
Pfam	PF01520. Amidase_3. 1 hit. PF11741. AMIN. 1 hit. PF01476. LysM. 1 hit. [Graphical view]
SMART	SM00646. Ami_3. 1 hit. SM00257. LysM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q48A25_COLP3

Accession

Primary (citable) accession number: Q48A25

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)