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Q488J7 (SELD_COLP3) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:CPS_0768
OrganismColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) [Complete proteome] [HAMAP]
Taxonomic identifier167879 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Colwelliaceae › Colwellia

Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 344344Selenide, water dikinase HAMAP MF_00625
PRO_0000318665

Regions

Nucleotide binding228 – 2347ATP Potential

Sites

Active site151 Potential
Site181Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
Q488J7 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 92C9DF993A9B279F

FASTA34436,019
        10         20         30         40         50         60 
MTSIRLTQYS HGAGCGCKIS PSVLDVMLKS SLALPVNDAL LVGNSTKDDA AVFDIGNDQG 

        70         80         90        100        110        120 
VISTTDFFMP IVDDPTDFGK IAACNAISDI YAMGGKPIMA IAILGWPVNL LAPEIAQQVL 

       130        140        150        160        170        180 
DGARAICAEA GIPLAGGHSI DAPEPIFGLA VTGLINNAHI KRNNTAEVGD LLYLTKPLGI 

       190        200        210        220        230        240 
GIMTTAEKQG KLLPEHAQLA PQAMKTLNVI GQKFAELEVV TAMTDVTGFA LLGHLLEMCQ 

       250        260        270        280        290        300 
GSGVAAVIDF EQVPRLDFVN DYIDQGCVPG GCERNFISYG EHVGPLSPKQ KILLCDPQTS 

       310        320        330        340 
GGLLVAVKPQ GKEAFEALCQ ENGLNLQPIG ELVAATSPTV SLLS

« Hide

References

[1]"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses."
Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M. expand/collapse author list , Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M.
Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) [PubMed: 16043709] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 34H / ATCC BAA-681.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000083 Genomic DNA. Translation: AAZ25295.1.
RefSeqYP_267517.1. NC_003910.7.

3D structure databases

ProteinModelPortalQ488J7.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ488J7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3519401.
GenomeReviewsGene locus CPS_0768 in contig CP000083_GR.
KEGGcps:CPS_0768.
NMPDRfig|167879.3.peg.580.
PATRIC21464847. VBIColPsy94388_0680.
TIGRCPS_0768.

Phylogenomic databases

eggNOGCOG0709.
HOGENOMHBG383791.
OMADYIAQGC.

Enzyme and pathway databases

BioCycCPSY167879:CPS_0768-MONOMER.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_COLP3
AccessionPrimary (citable) accession number: Q488J7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: September 13, 2005
Last modified: January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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