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Protein
Submitted name:

Putative dihydrolipoamide dehydrogenase

Gene

CPS_0826

Organism
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. oxidoreductase activity Source: InterPro

GO - Biological processi

  1. cell redox homeostasis Source: InterPro
Complete GO annotation...

Keywords - Ligandi

FADCombined sources, Flavoprotein, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciCPSY167879:GI48-826-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative dihydrolipoamide dehydrogenaseImported
Gene namesi
Ordered Locus Names:CPS_0826Imported
OrganismiColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)Imported
Taxonomic identifieri167879 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesColwelliaceaeColwellia
ProteomesiUP000000547: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi167879.CPS_0826.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IC9X-ray2.15A/B/C/D1-489[»]
ProteinModelPortaliQ488E0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ488E0.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1249.
HOGENOMiHOG000276709.
KOiK00382.
OMAiFTHIAMY.
OrthoDBiEOG6ZPSW0.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
InterProiIPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR013027. FAD_pyr_nucl-diS_OxRdtase.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD.
IPR001327. Pyr_OxRdtase_NAD-bd_dom.
[Graphical view]
PfamiPF00070. Pyr_redox. 1 hit.
PF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
[Graphical view]
PRINTSiPR00368. FADPNR.
SUPFAMiSSF55424. SSF55424. 1 hit.

Sequencei

Sequence statusi: Complete.

Q488E0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKVINVDVAI IGTGTAGMGA YRAAKKHTDK VVLIEGGAYG TTCARVGCMP
60 70 80 90 100
SKLLIAAADA SYHASQTDLF GIQVDRISVN GKAVMKRIQT ERDRFVGFVV
110 120 130 140 150
ESVESFDEQD KIRGFAKFLD EHTLQVDDHS QVIAKRIVIA TGSRPNYPEF
160 170 180 190 200
LAAAGSRLLT NDNLFELNDL PKSVAVFGPG VIGLELGQAL SRLGVIVKVF
210 220 230 240 250
GRSGSVANLQ DEEMKRYAEK TFNEEFYFDA KARVISTIEK EDAVEVIYFD
260 270 280 290 300
KSGQKTTESF QYVLAATGRK ANVDKLGLEN TSIELDKKNS PLFDELTLQT
310 320 330 340 350
SVDHIFVAGD ANNTLTLLHE AADDGKVAGT NAGAYPVIAQ GQRRAPLSVV
360 370 380 390 400
FTEPQVASVG LSLRQIEDLY ADQDAANYVV GQVSFEGQGR SRVMGKNKGL
410 420 430 440 450
LNVYADRTSG EFLGAEMFGP AAEHIGHLLA WARQQQMTVQ AMLTMPFYHP
460 470 480
VIEEGLRTAL RDAQQKLAIE KHDMNEFIMT HDNAMKLVI
Length:489
Mass (Da):53,476
Last modified:September 13, 2005 - v1
Checksum:iEF7D3BD5E806B23F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000083 Genomic DNA. Translation: AAZ24299.1.
RefSeqiYP_267575.1. NC_003910.7.

Genome annotation databases

EnsemblBacteriaiAAZ24299; AAZ24299; CPS_0826.
GeneIDi3519726.
KEGGicps:CPS_0826.
PATRICi21464947. VBIColPsy94388_0730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000083 Genomic DNA. Translation: AAZ24299.1.
RefSeqiYP_267575.1. NC_003910.7.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IC9X-ray2.15A/B/C/D1-489[»]
ProteinModelPortaliQ488E0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi167879.CPS_0826.

Protocols and materials databases

DNASUi3519726.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ24299; AAZ24299; CPS_0826.
GeneIDi3519726.
KEGGicps:CPS_0826.
PATRICi21464947. VBIColPsy94388_0730.

Phylogenomic databases

eggNOGiCOG1249.
HOGENOMiHOG000276709.
KOiK00382.
OMAiFTHIAMY.
OrthoDBiEOG6ZPSW0.

Enzyme and pathway databases

BioCyciCPSY167879:GI48-826-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ488E0.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
InterProiIPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR013027. FAD_pyr_nucl-diS_OxRdtase.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD.
IPR001327. Pyr_OxRdtase_NAD-bd_dom.
[Graphical view]
PfamiPF00070. Pyr_redox. 1 hit.
PF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
[Graphical view]
PRINTSiPR00368. FADPNR.
SUPFAMiSSF55424. SSF55424. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 34H / ATCC BAA-681Imported.
  2. "The structure of dihydrolipoamide dehydrogenase from Colwellia psychrerythraea 34H."
    Tan K., Rakowski E., Clancy S., Joachimiak A.
    Submitted (JUL-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) IN COMPLEX WITH FAD, ACTIVE SITE.

Entry informationi

Entry nameiQ488E0_COLP3
AccessioniPrimary (citable) accession number: Q488E0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: February 4, 2015
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.