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Protein
Submitted name:

Putative dihydrolipoamide dehydrogenase

Gene

CPS_0826

Organism
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei11FADCombined sources1
Binding sitei42FADCombined sources1
Binding sitei47FADCombined sources1
Binding sitei52FADCombined sources1
Binding sitei116FAD; via amide nitrogen and carbonyl oxygenCombined sources1
Binding sitei310FADCombined sources1
Binding sitei318FAD; via amide nitrogenCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi15 – 16FADCombined sources2
Nucleotide bindingi35 – 36FADCombined sources2
Nucleotide bindingi448 – 449FADCombined sources2

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

FADCombined sources, Flavoprotein, Nucleotide-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Putative dihydrolipoamide dehydrogenaseImported
Gene namesi
Ordered Locus Names:CPS_0826Imported
OrganismiColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)Imported
Taxonomic identifieri167879 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesColwelliaceaeColwellia
Proteomesi
  • UP000000547 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi43 ↔ 48Combined sources

Interactioni

Protein-protein interaction databases

STRINGi167879.CPS_0826.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3IC9X-ray2.15A/B/C/D1-489[»]
ProteinModelPortaliQ488E0.
SMRiQ488E0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ488E0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 325FAD/NAD-binding_domInterPro annotationAdd BLAST319
Domaini348 – 459Pyr_redox_dimInterPro annotationAdd BLAST112

Phylogenomic databases

eggNOGiENOG4105CCC. Bacteria.
COG1249. LUCA.
HOGENOMiHOG000276709.
KOiK00382.
OMAiPQADHRV.
OrthoDBiPOG091H03AH.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
3.50.50.60. 3 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
SSF55424. SSF55424. 1 hit.

Sequencei

Sequence statusi: Complete.

Q488E0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVINVDVAI IGTGTAGMGA YRAAKKHTDK VVLIEGGAYG TTCARVGCMP
60 70 80 90 100
SKLLIAAADA SYHASQTDLF GIQVDRISVN GKAVMKRIQT ERDRFVGFVV
110 120 130 140 150
ESVESFDEQD KIRGFAKFLD EHTLQVDDHS QVIAKRIVIA TGSRPNYPEF
160 170 180 190 200
LAAAGSRLLT NDNLFELNDL PKSVAVFGPG VIGLELGQAL SRLGVIVKVF
210 220 230 240 250
GRSGSVANLQ DEEMKRYAEK TFNEEFYFDA KARVISTIEK EDAVEVIYFD
260 270 280 290 300
KSGQKTTESF QYVLAATGRK ANVDKLGLEN TSIELDKKNS PLFDELTLQT
310 320 330 340 350
SVDHIFVAGD ANNTLTLLHE AADDGKVAGT NAGAYPVIAQ GQRRAPLSVV
360 370 380 390 400
FTEPQVASVG LSLRQIEDLY ADQDAANYVV GQVSFEGQGR SRVMGKNKGL
410 420 430 440 450
LNVYADRTSG EFLGAEMFGP AAEHIGHLLA WARQQQMTVQ AMLTMPFYHP
460 470 480
VIEEGLRTAL RDAQQKLAIE KHDMNEFIMT HDNAMKLVI
Length:489
Mass (Da):53,476
Last modified:September 13, 2005 - v1
Checksum:iEF7D3BD5E806B23F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000083 Genomic DNA. Translation: AAZ24299.1.

Genome annotation databases

EnsemblBacteriaiAAZ24299; AAZ24299; CPS_0826.
KEGGicps:CPS_0826.
PATRICi21464947. VBIColPsy94388_0730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000083 Genomic DNA. Translation: AAZ24299.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3IC9X-ray2.15A/B/C/D1-489[»]
ProteinModelPortaliQ488E0.
SMRiQ488E0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi167879.CPS_0826.

Protocols and materials databases

DNASUi3519726.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ24299; AAZ24299; CPS_0826.
KEGGicps:CPS_0826.
PATRICi21464947. VBIColPsy94388_0730.

Phylogenomic databases

eggNOGiENOG4105CCC. Bacteria.
COG1249. LUCA.
HOGENOMiHOG000276709.
KOiK00382.
OMAiPQADHRV.
OrthoDBiPOG091H03AH.

Miscellaneous databases

EvolutionaryTraceiQ488E0.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
3.50.50.60. 3 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
SSF55424. SSF55424. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ488E0_COLP3
AccessioniPrimary (citable) accession number: Q488E0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: November 2, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.