Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q488E0

- Q488E0_COLP3

UniProt

Q488E0 - Q488E0_COLP3

Protein
Submitted name:

Putative dihydrolipoamide dehydrogenase

Gene

CPS_0826

Organism
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 79 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei11 – 111FADImported
    Binding sitei42 – 421FADImported
    Binding sitei47 – 471FADImported
    Binding sitei52 – 521FADImported
    Binding sitei116 – 1161FAD; via amide nitrogen and carbonyl oxygenImported
    Binding sitei310 – 3101FADImported
    Binding sitei318 – 3181FAD; via amide nitrogenImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi15 – 162FADImported
    Nucleotide bindingi35 – 362FADImported
    Nucleotide bindingi448 – 4492FADImported

    GO - Molecular functioni

    1. flavin adenine dinucleotide binding Source: InterPro
    2. metal ion binding Source: UniProtKB-KW
    3. oxidoreductase activity Source: InterPro

    GO - Biological processi

    1. cell redox homeostasis Source: InterPro

    Keywords - Ligandi

    FADImported, Flavoprotein, Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciCPSY167879:GI48-826-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative dihydrolipoamide dehydrogenaseImported
    Gene namesi
    Ordered Locus Names:CPS_0826Imported
    OrganismiColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)Imported
    Taxonomic identifieri167879 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesColwelliaceaeColwellia
    ProteomesiUP000000547: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi167879.CPS_0826.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3IC9X-ray2.15A/B/C/D1-489[»]
    ProteinModelPortaliQ488E0.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ488E0.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1249.
    HOGENOMiHOG000276709.
    KOiK00382.
    OMAiMLAMPFY.
    OrthoDBiEOG6ZPSW0.

    Family and domain databases

    Gene3Di3.30.390.30. 1 hit.
    InterProiIPR016156. FAD/NAD-linked_Rdtase_dimer.
    IPR013027. FAD_pyr_nucl-diS_OxRdtase.
    IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
    IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD.
    IPR001327. Pyr_OxRdtase_NAD-bd_dom.
    [Graphical view]
    PfamiPF00070. Pyr_redox. 1 hit.
    PF07992. Pyr_redox_2. 1 hit.
    PF02852. Pyr_redox_dim. 1 hit.
    [Graphical view]
    PRINTSiPR00368. FADPNR.
    SUPFAMiSSF55424. SSF55424. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q488E0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKVINVDVAI IGTGTAGMGA YRAAKKHTDK VVLIEGGAYG TTCARVGCMP    50
    SKLLIAAADA SYHASQTDLF GIQVDRISVN GKAVMKRIQT ERDRFVGFVV 100
    ESVESFDEQD KIRGFAKFLD EHTLQVDDHS QVIAKRIVIA TGSRPNYPEF 150
    LAAAGSRLLT NDNLFELNDL PKSVAVFGPG VIGLELGQAL SRLGVIVKVF 200
    GRSGSVANLQ DEEMKRYAEK TFNEEFYFDA KARVISTIEK EDAVEVIYFD 250
    KSGQKTTESF QYVLAATGRK ANVDKLGLEN TSIELDKKNS PLFDELTLQT 300
    SVDHIFVAGD ANNTLTLLHE AADDGKVAGT NAGAYPVIAQ GQRRAPLSVV 350
    FTEPQVASVG LSLRQIEDLY ADQDAANYVV GQVSFEGQGR SRVMGKNKGL 400
    LNVYADRTSG EFLGAEMFGP AAEHIGHLLA WARQQQMTVQ AMLTMPFYHP 450
    VIEEGLRTAL RDAQQKLAIE KHDMNEFIMT HDNAMKLVI 489
    Length:489
    Mass (Da):53,476
    Last modified:September 13, 2005 - v1
    Checksum:iEF7D3BD5E806B23F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000083 Genomic DNA. Translation: AAZ24299.1.
    RefSeqiWP_011041675.1. NC_003910.7.
    YP_267575.1. NC_003910.7.

    Genome annotation databases

    EnsemblBacteriaiAAZ24299; AAZ24299; CPS_0826.
    GeneIDi3519726.
    KEGGicps:CPS_0826.
    PATRICi21464947. VBIColPsy94388_0730.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000083 Genomic DNA. Translation: AAZ24299.1 .
    RefSeqi WP_011041675.1. NC_003910.7.
    YP_267575.1. NC_003910.7.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3IC9 X-ray 2.15 A/B/C/D 1-489 [» ]
    ProteinModelPortali Q488E0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 167879.CPS_0826.

    Protocols and materials databases

    DNASUi 3519726.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ24299 ; AAZ24299 ; CPS_0826 .
    GeneIDi 3519726.
    KEGGi cps:CPS_0826.
    PATRICi 21464947. VBIColPsy94388_0730.

    Phylogenomic databases

    eggNOGi COG1249.
    HOGENOMi HOG000276709.
    KOi K00382.
    OMAi MLAMPFY.
    OrthoDBi EOG6ZPSW0.

    Enzyme and pathway databases

    BioCyci CPSY167879:GI48-826-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei Q488E0.

    Family and domain databases

    Gene3Di 3.30.390.30. 1 hit.
    InterProi IPR016156. FAD/NAD-linked_Rdtase_dimer.
    IPR013027. FAD_pyr_nucl-diS_OxRdtase.
    IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
    IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD.
    IPR001327. Pyr_OxRdtase_NAD-bd_dom.
    [Graphical view ]
    Pfami PF00070. Pyr_redox. 1 hit.
    PF07992. Pyr_redox_2. 1 hit.
    PF02852. Pyr_redox_dim. 1 hit.
    [Graphical view ]
    PRINTSi PR00368. FADPNR.
    SUPFAMi SSF55424. SSF55424. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 34H / ATCC BAA-681Imported.
    2. "The structure of dihydrolipoamide dehydrogenase from Colwellia psychrerythraea 34H."
      Tan K., Rakowski E., Clancy S., Joachimiak A.
      Submitted (JUL-2009) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) IN COMPLEX WITH FAD.

    Entry informationi

    Entry nameiQ488E0_COLP3
    AccessioniPrimary (citable) accession number: Q488E0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3