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Q487K9 (Q487K9_COLP3) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative decarboxylase EMBL AAZ25150.1
Gene names
Ordered Locus Names:CPS_1007
OrganismColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) [Complete proteome] [HAMAP] EMBL AAZ25150.1
Taxonomic identifier167879 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Colwelliaceae › Colwellia ›

Protein attributes

Sequence length543 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarboxylic acid metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncarboxy-lyase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q487K9 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 651B51A16DB08B72

FASTA54360,524
        10         20         30         40         50         60 
MKATKRIAEA TQESLHRIFT IAEAPDSTLG RLEQEMSQNL VGFLNNHIVA SKNALTDIEQ 

        70         80         90        100        110        120 
DFINARIPEQ PEFVSDHMHH LLDKLVAQSV HTSSPSFIGH MTSALPSFIL PLSKLMVGLN 

       130        140        150        160        170        180 
QNLVKVETSK AFTPLERQVL GMMHNLVYQH DDVFYKNWMH SAEHSLGAFC SGGTVANITA 

       190        200        210        220        230        240 
LWVARNKLLK ADGDFRGVAR EGLHRAMRHY GYQDLAILVS DRGHYSLKKS ADILGIGQEN 

       250        260        270        280        290        300 
VIAIPTDEHN KIDCQKLADK CQQLAAQNIK VLAIVGVAGT TETGNIDPLD KIAEIAQQNQ 

       310        320        330        340        350        360 
CHFHVDAAWG GATLLSNKYR PLLKGIEQAD SVTIDAHKQM YVPMGAGLVI FKDPASVSAI 

       370        380        390        400        410        420 
EHHAEYILRK GSKDLGSHTL EGSRPGMAML VYSSLHIISR PGYEMLINQA IEKAEYFADI 

       430        440        450        460        470        480 
IHQHDDFELI TRPELCLLTY RYAPKSVQAL LARNDDEANK SVNMLLGKLT KFIQKRQRED 

       490        500        510        520        530        540 
GRSFVSRTRI EVSRYGGEKV IVFRVVLANP LTTKEILQGI LQEQCQLAQE SEQFLPELLQ 


AAK

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References

[1]"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses."
Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M. expand/collapse author list , Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M.
Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 34H / ATCC BAA-681.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000083 Genomic DNA. Translation: AAZ25150.1.
RefSeqYP_267756.1. NC_003910.7.

3D structure databases

ProteinModelPortalQ487K9.
ModBaseSearch...

Protein-protein interaction databases

STRING167879.CPS_1007.

Protocols and materials databases

DNASU3523295.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ25150; AAZ25150; CPS_1007.
GeneID3523295.
KEGGcps:CPS_1007.
PATRIC21465291. VBIColPsy94388_0902.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMACHFHVDA.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycCPSY167879:GI48-1007-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ487K9_COLP3
AccessionPrimary (citable) accession number: Q487K9
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 29, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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