Reviewed, UniProtKB/Swiss-Prot Q485H8 (RPIA_COLP3)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	CPS_1545

Organism

Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) [Complete proteome] [HAMAP]

Taxonomic identifier

167879 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Colwelliaceae › Colwellia

Protein attributes

Sequence length	218 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 218	218	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016921

Sequences

	Sequence		Length	Mass (Da)
	Q485H8-1 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 7F834448EAFA64E8	FASTA	218	23,279
	10 20 30 40 50 60 MTQDEMKNAA AIKALEFIEN DTIVGVGTGS TVNFFIEALA SMKDKIAGAV SSSEESTKRL 70 80 90 100 110 120 KAHGIEVFDL NSVDVLDVYV DGADEITRHM SMIKGGGAAL TREKIVAAVA KKFICIADDS 130 140 150 160 170 180 KQVKVLGNFP LPVEVIPMAR SYVARELVKL GGDPVYRQGV TTDNGNVILD VYNLEILDPK 190 200 210 ALETQINAIV GVVTNGLFAL RGADILVLGS KDGIQVIQ

References

[1]

"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses." Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M. , Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M. Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) [PubMed: 16043709] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000083 Genomic DNA. Translation: AAZ25095.1.
RefSeq	YP_268287.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3518555.
GenomeReviews	Gene locus CPS_1545 in contig CP000083_GR.
KEGG	cps:CPS_1545.
NMPDR	fig|167879.3.peg.1806.
TIGR	CPS_1545.
Phylogenomic databases
HOGENOM	Q485H8.
OMA	Q485H8. ADKFICI.
Enzyme and pathway databases
BioCyc	CPSY167879:CPS_1545-MON.
Family and domain databases
HAMAP	MF_00170. [Tree]
InterPro	IPR004788. RpiA. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
ProDom	PD005813. RpiA. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_COLP3

Accession

Primary (citable) accession number: Q485H8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	September 13, 2005
Last modified:	June 16, 2009
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)