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Protein
Submitted name:

Catabolite regulator protein

Gene

ccpA

Organism
Lactobacillus casei
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Catabolite regulator proteinImported
Submitted name:
Ccpa proteinImported
Gene namesi
Name:ccpAImported
OrganismiLactobacillus caseiImported
Taxonomic identifieri1582 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Interactioni

Protein-protein interaction databases

STRINGi543734.LCABL_08700.

Structurei

3D structure databases

SMRiQ48518. Positions 6-333.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 6055HTH lacI-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH lacI-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105ETE. Bacteria.
COG1609. LUCA.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR006377. CcpA.
IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
PRINTSiPR00036. HTHLACI.
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
TIGRFAMsiTIGR01481. ccpA. 1 hit.
PROSITEiPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q48518-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKQTITIYD VAREANVSMA TVSRVVNGNP NVKPATRKKV LEVIERLDYR
60 70 80 90 100
PNAVARGLAS KKTTTVGVII PDVTNMFFSS LARGIDDVAT MYKYNIILAN
110 120 130 140 150
SDENNQKEVT VLNTLLAKQV DGLIFMGHEL TDSIRAEFSR SKTPVVLAGS
160 170 180 190 200
IDPDEQVGSV NIDYVAAVEE ATRQLLESGN KRVALATGSL THPINGQFRL
210 220 230 240 250
KGYKQALEKA GVAYDESLIF ENEPSYQAGL ALFDKLQKVG ATAVIAGDDE
260 270 280 290 300
LAVGLLDGAI DKGVKVPDDF EIITSNNTKL TEMTRPQLTS IDQPLYDIGA
310 320 330
VAMRLLTKMM NKEEIEEKTV MLGFDILKRG STK
Length:333
Mass (Da):36,403
Last modified:June 1, 1998 - v2
Checksum:i74D01BB6FC03DD8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28137 Genomic DNA. Translation: AAC46030.1.
AJ003194 Genomic DNA. Translation: CAA05972.1.
RefSeqiWP_003564050.1. NZ_JUQW01000210.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28137 Genomic DNA. Translation: AAC46030.1.
AJ003194 Genomic DNA. Translation: CAA05972.1.
RefSeqiWP_003564050.1. NZ_JUQW01000210.1.

3D structure databases

SMRiQ48518. Positions 6-333.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi543734.LCABL_08700.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105ETE. Bacteria.
COG1609. LUCA.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR006377. CcpA.
IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
PRINTSiPR00036. HTHLACI.
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
TIGRFAMsiTIGR01481. ccpA. 1 hit.
PROSITEiPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Catabolite repression in Lactobacillus casei ATCC 393 is mediated by CcpA."
    Monedero V., Gosalbes M.J., Perez-Martinez G.
    J. Bacteriol. 179:6657-6664(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 393Imported.

Entry informationi

Entry nameiQ48518_LACCA
AccessioniPrimary (citable) accession number: Q48518
Secondary accession number(s): F2M8B8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 1, 1998
Last modified: May 11, 2016
This is version 86 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.