Unreviewed, UniProtKB/TrEMBL Q48502 (Q48502_LACAM)

Names and origin

Protein names	Submitted name:     Alpha-amylase EMBL AAC45781.1
Organism	Lactobacillus amylovorus EMBL AAC45781.1
Taxonomic identifier	1604 [NCBI]
Taxonomic lineage	Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	953 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615V0

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q48502-1 [UniParc]. Last modified January 1, 1998. Version 2. Checksum: F6ABDEDE5619C5F3	FASTA	953	104,991
	10 20 30 40 50 60 MKKKKSFWLV SFLVIVASVF FISFGFSNHS KQVAQAASDT TSTDHSSNDT ADSVSDGVIL 70 80 90 100 110 120 HAWCWSFNTI KNNLKQIHDA GYTAVQTSPV NEVKVGNSGS KSLNNWYWLY QPTKYSIGNY 130 140 150 160 170 180 YLGTEAEFKS MCAAAKEYNI RIIVDATLND TTSDYSAISD EIKSISDWTH GNTQISNWSD 190 200 210 220 230 240 REDVTQNSLL GFYDWNTQNS QVQTYLKNHL ERLISDGASG FRYDAATHIE LPSQYDGSYG 250 260 270 280 290 300 SNFWPNITDN GSEFQYGEVL QDSISKESDY ANYMSVTASN YGNTIRNALK NRDFTASTLQ 310 320 330 340 350 360 NFNISVPASK LVTWVESHDN YANDDQVSTW MNSSDIKLGW AVVASRSGSV PLFFDRPVDG 370 380 390 400 410 420 GNGTRFPGSS EIGDAGSSLY YDKAVVAVNK FHNAMAGQSE YISNPNGNTK IFENERGSKG 430 440 450 460 470 480 VVFANASDSS YSLNVKTSLA DGTYENKAGS DEFTVKNGYL TGTIQGREVV VLYGDPTSSS 490 500 510 520 530 540 STTTETKKVY FEKPSSWGSR VYAYVYNKNT NKAITSAWPG KKMTALGNDK YELDLDTDED 550 560 570 580 590 600 DSDLAVIFTD GTKQTPAANE AGFTFTADAT YDQNGVVKKV YFEKPSSWGS RVYAYVYNKN 610 620 630 640 650 660 TNKAITSAWP GKKMTALGND KYELDLDTDE DDSDLAVIFT DGTKQTPAAN EAGFTFTADA 670 680 690 700 710 720 TYDQNGVVKK VYFEKPSSWG SRVYAYVYNK NTNKAITSAW PGKKMTALGN DKYELDLDTD 730 740 750 760 770 780 EDDSDLAVIF TDGTKQTPAA NEAGFTFTAD ATYDQNGVVK KVYFEKPSSW GSRVYAYVYN 790 800 810 820 830 840 KNTNKAITSA WPGKKMTALG NDKYELDLDT DEDDSDLAVI FTDGTKQTPA ANEAGFTFTA 850 860 870 880 890 900 DATYDQNGVV KKVYFEKPSS WGSRVYAYVY NKNTNKAITS AWPGKKMTAL GNDKYELDLD 910 920 930 940 950 TDEDDSDLAV IFTDGTKQTP AANEAGFTFT ADATYDQNGV VRTSDSSSTS SNS

References

[1]

"Molecular characterization of the alpha-amylase genes of Lactobacillus plantarum A6 and Lactobacillus amylovorus reveals an unusual 3' end structure with direct tandem repeats and suggests a common evolutionary origin." Giraud E., Cuny G. Gene 198:149-157(1997) [PubMed: 9370276] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CIP 102989 EMBL AAC45781.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U62096 Genomic DNA. Translation: AAC45781.1.
3D structure databases
HSSP	HSSP built from PDB template 1BAG based on UniProtKB P00691.
ModBase	Search...
Protein family/group databases
CAZy	CBM26. Carbohydrate-Binding Module Family 26. GH13. Glycoside Hydrolase Family 13.
Family and domain databases
InterPro	IPR006048. A-amylase_b_C. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02806. Alpha-amylase_C. 1 hit. [Graphical view]
PRINTS	PR00110. ALPHAAMYLASE.
SMART	SM00632. Aamy_C. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q48502_LACAM

Accession

Primary (citable) accession number: Q48502

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	January 1, 1998
Last modified:	June 16, 2009
This is version 47 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)