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Q48502 (Q48502_LACAM) Unreviewed, UniProtKB/TrEMBL

Last modified May 31, 2011. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-amylase EMBL AAC45781.1
OrganismLactobacillus amylovorus EMBL AAC45781.1
Taxonomic identifier1604 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length953 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q48502 [UniParc].

Last modified January 1, 1998. Version 2.
Checksum: F6ABDEDE5619C5F3

FASTA953104,991
        10         20         30         40         50         60 
MKKKKSFWLV SFLVIVASVF FISFGFSNHS KQVAQAASDT TSTDHSSNDT ADSVSDGVIL 

        70         80         90        100        110        120 
HAWCWSFNTI KNNLKQIHDA GYTAVQTSPV NEVKVGNSGS KSLNNWYWLY QPTKYSIGNY 

       130        140        150        160        170        180 
YLGTEAEFKS MCAAAKEYNI RIIVDATLND TTSDYSAISD EIKSISDWTH GNTQISNWSD 

       190        200        210        220        230        240 
REDVTQNSLL GFYDWNTQNS QVQTYLKNHL ERLISDGASG FRYDAATHIE LPSQYDGSYG 

       250        260        270        280        290        300 
SNFWPNITDN GSEFQYGEVL QDSISKESDY ANYMSVTASN YGNTIRNALK NRDFTASTLQ 

       310        320        330        340        350        360 
NFNISVPASK LVTWVESHDN YANDDQVSTW MNSSDIKLGW AVVASRSGSV PLFFDRPVDG 

       370        380        390        400        410        420 
GNGTRFPGSS EIGDAGSSLY YDKAVVAVNK FHNAMAGQSE YISNPNGNTK IFENERGSKG 

       430        440        450        460        470        480 
VVFANASDSS YSLNVKTSLA DGTYENKAGS DEFTVKNGYL TGTIQGREVV VLYGDPTSSS 

       490        500        510        520        530        540 
STTTETKKVY FEKPSSWGSR VYAYVYNKNT NKAITSAWPG KKMTALGNDK YELDLDTDED 

       550        560        570        580        590        600 
DSDLAVIFTD GTKQTPAANE AGFTFTADAT YDQNGVVKKV YFEKPSSWGS RVYAYVYNKN 

       610        620        630        640        650        660 
TNKAITSAWP GKKMTALGND KYELDLDTDE DDSDLAVIFT DGTKQTPAAN EAGFTFTADA 

       670        680        690        700        710        720 
TYDQNGVVKK VYFEKPSSWG SRVYAYVYNK NTNKAITSAW PGKKMTALGN DKYELDLDTD 

       730        740        750        760        770        780 
EDDSDLAVIF TDGTKQTPAA NEAGFTFTAD ATYDQNGVVK KVYFEKPSSW GSRVYAYVYN 

       790        800        810        820        830        840 
KNTNKAITSA WPGKKMTALG NDKYELDLDT DEDDSDLAVI FTDGTKQTPA ANEAGFTFTA 

       850        860        870        880        890        900 
DATYDQNGVV KKVYFEKPSS WGSRVYAYVY NKNTNKAITS AWPGKKMTAL GNDKYELDLD 

       910        920        930        940        950 
TDEDDSDLAV IFTDGTKQTP AANEAGFTFT ADATYDQNGV VRTSDSSSTS SNS

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References

[1]"Molecular characterization of the alpha-amylase genes of Lactobacillus plantarum A6 and Lactobacillus amylovorus reveals an unusual 3' end structure with direct tandem repeats and suggests a common evolutionary origin."
Giraud E., Cuny G.
Gene 198:149-157(1997) [PubMed: 9370276] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CIP 102989 EMBL AAC45781.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U62096 Genomic DNA. Translation: AAC45781.1.

3D structure databases

HSSPHSSP built from PDB template 1BAG based on UniProtKB P00691.
ProteinModelPortalQ48502.
SMRQ48502. Positions 50-475.
ModBaseSearch...

Protein family/group databases

CAZyCBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR006048. A-amylase_b_C.
IPR015902. Alpha_amylase.
IPR006046. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ48502_LACAM
AccessionPrimary (citable) accession number: Q48502
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: January 1, 1998
Last modified: May 31, 2011
This is version 55 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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