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Q483R4 (Q483R4_COLP3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Deoxyribose-phosphate aldolase EMBL AAZ26819.1
EC=4.1.2.4 EMBL AAZ26819.1
Gene names
Name:deoC EMBL AAZ26819.1
Ordered Locus Names:CPS_1972
OrganismColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) [Complete proteome] [HAMAP] EMBL AAZ26819.1
Taxonomic identifier167879 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Colwelliaceae › Colwellia

Protein attributes

Sequence length257 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343

Catalytic activity

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343

Ontologies

Keywords
   LigandSchiff base SAAS SAAS011343
   Molecular functionLyase SAAS SAAS011343 EMBL AAZ26819.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processdeoxyribonucleotide catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functiondeoxyribose-phosphate aldolase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q483R4 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 25C85D53D8622669

FASTA25727,470
        10         20         30         40         50         60 
MSDIKAVAQR ALSLMDLTSL TNTETDQEII DLCRQAKSPA GETAAICIFP RFIPVAKKAL 

        70         80         90        100        110        120 
KAQQTPHIKI ATVTNFPQGN DDLDIALAET RAAVAYGADE VDLVFPYRAL IQGNETIGFD 

       130        140        150        160        170        180 
MVKVCKQACS GNAKLKVIIE TGELKSEELI RKASEIAINA GADFIKTSTG KVAINATPEA 

       190        200        210        220        230        240 
AKVMLTVIKN KNTAVGFKPA GGVRNADDAA IYLDLADNIL GNEWADANHF RFGASSLLIS 

       250 
LLDTLGHKSN TKSSSNY

« Hide

References

[1]"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses."
Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M. expand/collapse author list , Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M.
Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) [PubMed: 16043709] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000083 Genomic DNA. Translation: AAZ26819.1.
RefSeqYP_268702.1. NC_003910.7.

3D structure databases

ProteinModelPortalQ483R4.
SMRQ483R4. Positions 1-247.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ483R4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3521074.
GenomeReviewsGene locus CPS_1972 in contig CP000083_GR.
KEGGcps:CPS_1972.
NMPDRfig|167879.3.peg.2053.
PATRIC21467075. VBIColPsy94388_1778.
TIGRCPS_1972.

Phylogenomic databases

eggNOGCOG0274.
HOGENOMHBG636421.
OMAFELVKQC.
ProtClustDBPRK05283.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/AroFGH_arch.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01619.
PANTHERPTHR10889. DeoC. 1 hit.
PfamPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFPIRSF001357. DeoC. 1 hit.
TIGRFAMsTIGR00126. DeoC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ483R4_COLP3
AccessionPrimary (citable) accession number: Q483R4
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info