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Protein

UPF0352 protein CPS_2611

Gene

CPS_2611

Organism
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0352 protein CPS_2611UniRule annotation
Gene namesi
Ordered Locus Names:CPS_2611
OrganismiColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Taxonomic identifieri167879 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesColwelliaceaeColwellia
Proteomesi
  • UP000000547 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002017831 – 68UPF0352 protein CPS_2611Add BLAST68

Interactioni

Protein-protein interaction databases

STRINGi167879.CPS_2611.

Structurei

Secondary structure

168
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi9 – 25Combined sources17
Helixi30 – 45Combined sources16
Helixi50 – 52Combined sources3
Helixi53 – 68Combined sources16

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2JR2NMR-A/B1-68[»]
2OTAX-ray2.20A/B1-68[»]
ProteinModelPortaliQ481E4.
SMRiQ481E4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ481E4.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0352 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105PAN. Bacteria.
COG3082. LUCA.
HOGENOMiHOG000218499.
KOiK09904.
OMAiHQAPTDL.
OrthoDBiPOG091H05IJ.

Family and domain databases

Gene3Di1.10.3390.10. 1 hit.
HAMAPiMF_00816. UPF0352. 1 hit.
InterProiView protein in InterPro
IPR009857. UPF0352.
IPR023202. YejL_dom.
PfamiView protein in Pfam
PF07208. DUF1414. 1 hit.
PIRSFiPIRSF006188. UCP006188. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD027794. UPF0352. 1 hit.
SUPFAMiSSF158651. SSF158651. 1 hit.

Sequencei

Sequence statusi: Complete.

Q481E4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPIVSKYSNE RVEKIIQDLL DVLVKEEVTP DLALMCLGNA VTNIIAQVPE
60
SKRVAVVDNF TKALKQSV
Length:68
Mass (Da):7,526
Last modified:September 13, 2005 - v1
Checksum:i24320B1259BA1680
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000083 Genomic DNA. Translation: AAZ26870.1.
RefSeqiWP_011043419.1. NC_003910.7.

Genome annotation databases

EnsemblBacteriaiAAZ26870; AAZ26870; CPS_2611.
KEGGicps:CPS_2611.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiY2611_COLP3
AccessioniPrimary (citable) accession number: Q481E4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: September 13, 2005
Last modified: June 7, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries