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Q47YS4

- Q47YS4_COLP3

UniProt

Q47YS4 - Q47YS4_COLP3

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Protein
Alpha-amylase
Gene
CPS_3370
Organism
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciCPSY167879:GI48-3370-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:CPS_3370Imported
OrganismiColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)Imported
Taxonomic identifieri167879 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesColwelliaceaeColwellia
ProteomesiUP000000547: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi167879.CPS_3370.

Structurei

3D structure databases

ProteinModelPortaliQ47YS4.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000274290.
KOiK01176.
OMAiDLDPNNW.
OrthoDBiEOG6K6V4W.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q47YS4-1 [UniParc]FASTAAdd to Basket

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MKTTPLLKKF TQASIIASSL LFSQGSYADT ILHAFNWTYD DVATKAQEIA    50
DLGYKKVLVS PAYKSSGDQW WARYQPQDFR VIHSPLGDTN DFKDMVNALK 100
AKGVETYADI VFNHMANESS QRSDLNYPGT AVLATYAADS TYYNSIKLFG 150
DLQTGSYGAN DFHPAGCITD WGNPGHVQYW RLCGGNGDVG LPDLDPNNWV 200
VSQQQAYLQA LKAIGVTGFR VDAAKHMSNY HINAVFNNDI KNGVHVFGEI 250
ITSGGAGDNS YDAFLAPYLN DTGHSAYDFP LFASLRGALG FGGSMNQLVD 300
PAAYGQALTP DKAVTFSITH DIPTNEGFRY QILNATDEVL ANAYIMGRDG 350
GTPMMYSDHN ESNDNNRWLD LYKRSDVAGM VKFHNTAQGH GMQVMSFNDC 400
IILFKRDHIG VVGINKCDNG QDVWVNTAEH NLWWNKNYRD VVEGVDVQNI 450
NSQWHKFYLP GRKARMWLME 470
Length:470
Mass (Da):52,310
Last modified:September 13, 2005 - v1
Checksum:i741D54850DF96547
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000083 Genomic DNA. Translation: AAZ26198.1.
RefSeqiYP_270046.1. NC_003910.7.

Genome annotation databases

EnsemblBacteriaiAAZ26198; AAZ26198; CPS_3370.
GeneIDi3520448.
KEGGicps:CPS_3370.
PATRICi21469695. VBIColPsy94388_3047.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000083 Genomic DNA. Translation: AAZ26198.1 .
RefSeqi YP_270046.1. NC_003910.7.

3D structure databases

ProteinModelPortali Q47YS4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 167879.CPS_3370.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ26198 ; AAZ26198 ; CPS_3370 .
GeneIDi 3520448.
KEGGi cps:CPS_3370.
PATRICi 21469695. VBIColPsy94388_3047.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000274290.
KOi K01176.
OMAi DLDPNNW.
OrthoDBi EOG6K6V4W.

Enzyme and pathway databases

BioCyci CPSY167879:GI48-3370-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 34H / ATCC BAA-681.

Entry informationi

Entry nameiQ47YS4_COLP3
AccessioniPrimary (citable) accession number: Q47YS4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: July 9, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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