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Q47YS4

- Q47YS4_COLP3

UniProt

Q47YS4 - Q47YS4_COLP3

Protein

Alpha-amylase

Gene

CPS_3370

Organism
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciCPSY167879:GI48-3370-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:CPS_3370Imported
    OrganismiColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)Imported
    Taxonomic identifieri167879 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesColwelliaceaeColwellia
    ProteomesiUP000000547: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi167879.CPS_3370.

    Structurei

    3D structure databases

    ProteinModelPortaliQ47YS4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000274290.
    KOiK01176.
    OMAiDLDPNNW.
    OrthoDBiEOG6K6V4W.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q47YS4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKTTPLLKKF TQASIIASSL LFSQGSYADT ILHAFNWTYD DVATKAQEIA    50
    DLGYKKVLVS PAYKSSGDQW WARYQPQDFR VIHSPLGDTN DFKDMVNALK 100
    AKGVETYADI VFNHMANESS QRSDLNYPGT AVLATYAADS TYYNSIKLFG 150
    DLQTGSYGAN DFHPAGCITD WGNPGHVQYW RLCGGNGDVG LPDLDPNNWV 200
    VSQQQAYLQA LKAIGVTGFR VDAAKHMSNY HINAVFNNDI KNGVHVFGEI 250
    ITSGGAGDNS YDAFLAPYLN DTGHSAYDFP LFASLRGALG FGGSMNQLVD 300
    PAAYGQALTP DKAVTFSITH DIPTNEGFRY QILNATDEVL ANAYIMGRDG 350
    GTPMMYSDHN ESNDNNRWLD LYKRSDVAGM VKFHNTAQGH GMQVMSFNDC 400
    IILFKRDHIG VVGINKCDNG QDVWVNTAEH NLWWNKNYRD VVEGVDVQNI 450
    NSQWHKFYLP GRKARMWLME 470
    Length:470
    Mass (Da):52,310
    Last modified:September 13, 2005 - v1
    Checksum:i741D54850DF96547
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000083 Genomic DNA. Translation: AAZ26198.1.
    RefSeqiYP_270046.1. NC_003910.7.

    Genome annotation databases

    EnsemblBacteriaiAAZ26198; AAZ26198; CPS_3370.
    GeneIDi3520448.
    KEGGicps:CPS_3370.
    PATRICi21469695. VBIColPsy94388_3047.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000083 Genomic DNA. Translation: AAZ26198.1 .
    RefSeqi YP_270046.1. NC_003910.7.

    3D structure databases

    ProteinModelPortali Q47YS4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 167879.CPS_3370.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ26198 ; AAZ26198 ; CPS_3370 .
    GeneIDi 3520448.
    KEGGi cps:CPS_3370.
    PATRICi 21469695. VBIColPsy94388_3047.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000274290.
    KOi K01176.
    OMAi DLDPNNW.
    OrthoDBi EOG6K6V4W.

    Enzyme and pathway databases

    BioCyci CPSY167879:GI48-3370-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 34H / ATCC BAA-681Imported.

    Entry informationi

    Entry nameiQ47YS4_COLP3
    AccessioniPrimary (citable) accession number: Q47YS4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3