Q47Y25 (Q47Y25_COLP3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Epimerase family protein EMBL AAZ26669.1

Gene names

Ordered Locus Names:

CPS_3627

Organism

Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) [Complete proteome] [HAMAP] EMBL AAZ26669.1

Taxonomic identifier

167879 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Colwelliaceae › Colwellia › Colwellia psychrerythraea

Protein attributes

Sequence length	307 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro isomerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q47Y25 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: A47E7BE84E201029	FASTA	307	34,130
	10 20 30 40 50 60 MTKIPLNNDF AQVTSITLNQ ESGEERFEGL NISHAYCQAK VSLYGGQVLS FKPSGHRDVL 70 80 90 100 110 120 WLSEQASYQM GKAIRGGIPL CWPWFGANDK QSQYLTENPN TALKPVNHGF ARQLPWHITS 130 140 150 160 170 180 INADESGVTL VLVLSGDKQH PLWPNAYTLT QTLFFGKNLK QTLTMSNDSL EDAQYSAALH 190 200 210 220 230 240 SYFTVSNPGN VSIDALTGVR YSDKLTGNSS TQQEAVSCVG EIDREYHSSE KMTVIDNHWQ 250 260 270 280 290 300 RKIDIISSNC QQWVLWNPGT ELANTMADIH PQGEQEYVCL EAANTSWQII PAGETVVISQ EITVTNC

References

[1]

"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses." Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M. , Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M. Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 34H / ATCC BAA-681.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000083 Genomic DNA. Translation: AAZ26669.1.
RefSeq	YP_270295.1. NC_003910.7.
3D structure databases
ProteinModelPortal	Q47Y25.
ModBase	Search...
Protein-protein interaction databases
STRING	167879.CPS_3627.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ26669; AAZ26669; CPS_3627.
GeneID	3520922.
KEGG	cps:CPS_3627.
PATRIC	21470181. VBIColPsy94388_3283.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0676.
HOGENOM	HOG000283048.
KO	K01792.
OMA	LWNPWIE.
ProtClustDB	CLSK749851.
Enzyme and pathway databases
BioCyc	CPSY167879:GI48-3649-MONOMER.
Family and domain databases
Gene3D	2.70.98.10. 1 hit.
InterPro	IPR008183. Aldose_1/G6P_1-epimerase. IPR025532. G6P_1-epimerase. IPR011013. Gal_mutarotase_SF_dom. IPR014718. Glyco_hydro-type_carb-bd_sub. [Graphical view]
Pfam	PF01263. Aldose_epim. 1 hit. [Graphical view]
PIRSF	PIRSF016020. PHexose_mutarotase. 1 hit.
SUPFAM	SSF74650. Gal_mut_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q47Y25_COLP3

Accession

Primary (citable) accession number: Q47Y25

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)