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Q47Y25 (Q47Y25_COLP3) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

isomerase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1801 By similarity PIRSR PIRSR016020-1
Active site2811 By similarity PIRSR PIRSR016020-1

Sequences

Sequence LengthMass (Da)Tools
Q47Y25 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: A47E7BE84E201029

FASTA30734,130
        10         20         30         40         50         60 
MTKIPLNNDF AQVTSITLNQ ESGEERFEGL NISHAYCQAK VSLYGGQVLS FKPSGHRDVL 

        70         80         90        100        110        120 
WLSEQASYQM GKAIRGGIPL CWPWFGANDK QSQYLTENPN TALKPVNHGF ARQLPWHITS 

       130        140        150        160        170        180 
INADESGVTL VLVLSGDKQH PLWPNAYTLT QTLFFGKNLK QTLTMSNDSL EDAQYSAALH 

       190        200        210        220        230        240 
SYFTVSNPGN VSIDALTGVR YSDKLTGNSS TQQEAVSCVG EIDREYHSSE KMTVIDNHWQ 

       250        260        270        280        290        300 
RKIDIISSNC QQWVLWNPGT ELANTMADIH PQGEQEYVCL EAANTSWQII PAGETVVISQ 


EITVTNC 

« Hide

References

[1]"The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses."
Methe B.A., Nelson K.E., Deming J.W., Momen B., Melamud E., Zhang X., Moult J., Madupu R., Nelson W.C., Dodson R.J., Brinkac L.M., Daugherty S.C., Durkin A.S., DeBoy R.T., Kolonay J.F., Sullivan S.A., Zhou L., Davidsen T.M. expand/collapse author list , Wu M., Huston A.L., Lewis M., Weaver B., Weidman J.F., Khouri H., Utterback T.R., Feldblyum T.V., Fraser C.M.
Proc. Natl. Acad. Sci. U.S.A. 102:10913-10918(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 34H / ATCC BAA-681.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000083 Genomic DNA. Translation: AAZ26669.1.
RefSeqYP_270295.1. NC_003910.7.

3D structure databases

ProteinModelPortalQ47Y25.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING167879.CPS_3627.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ26669; AAZ26669; CPS_3627.
GeneID3520922.
KEGGcps:CPS_3627.
PATRIC21470181. VBIColPsy94388_3283.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0676.
HOGENOMHOG000283048.
KOK01792.
OMACWPWFGN.
OrthoDBEOG6M0T7Z.

Enzyme and pathway databases

BioCycCPSY167879:GI48-3627-MONOMER.

Family and domain databases

Gene3D2.70.98.10. 1 hit.
InterProIPR008183. Aldose_1/G6P_1-epimerase.
IPR025532. G6P_1-epimerase.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamPF01263. Aldose_epim. 1 hit.
[Graphical view]
PIRSFPIRSF016020. PHexose_mutarotase. 1 hit.
SUPFAMSSF74650. SSF74650. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47Y25_COLP3
AccessionPrimary (citable) accession number: Q47Y25
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)