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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi13 – 186FADUniRule annotation
Nucleotide bindingi273 – 28715NADUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Enzyme and pathway databases

BioCyciCPSY167879:GI48-5048-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:CPS_5047
OrganismiColwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus)
Taxonomic identifieri167879 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesColwelliaceaeColwellia
Proteomesi
  • UP000000547 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 629629tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGPRO_0000117090Add
BLAST

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi167879.CPS_5047.

Structurei

3D structure databases

ProteinModelPortaliQ47U38.
SMRiQ47U38. Positions 1-552.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiEOG6W9X6J.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47U38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWYQESYDVI VVGGGHAGTE ASLAAARMGC KTLLLTHNID TLGQMSCNPA
60 70 80 90 100
IGGIGKGHLV KEIDALGGLM ATAIDHSAIQ FRTLNSSKGP AVRATRAQAD
110 120 130 140 150
RILYRNYVRN TLENQENLTI FQQPCDDLIL ENDRVVGVST QMGLKFKGKS
160 170 180 190 200
VVLTVGTFLS GLIHIGLNNY QGGRAGDPAS VNLAAKMRDM PFRMDRLKTG
210 220 230 240 250
TPPRLDARSL DFSVMEEQAG DTPSPVFSFM GSQADHPEQI SCFITHTNEQ
260 270 280 290 300
THQHIRDGLD RSPMYTGVIE GVGPRYCPSI EDKITRFADK SSHQIFVEPE
310 320 330 340 350
GLTTHEVYPN GISTSLPFDV QMNLVRSIKG FENAFITRPG YAIEYDYFDP
360 370 380 390 400
RDLKQSLESK FVQNLYFAGQ INGTTGYEEA GAQGLIAGAN AANRVKERDE
410 420 430 440 450
FTLGRDQAYM GVLIDDLATL GTKEPYRMFT SRAEYRLLLR EDNADIRLTE
460 470 480 490 500
QGRKIGLVGD TRWQRFNEKM ENVELERQRL RSTWVQKDHT KIDQINALLK
510 520 530 540 550
TPMSKEASLE DLIRRPEVNY TDLMKIEGLG PAIEDSQASE QIEIQTKYAG
560 570 580 590 600
YIDRQLDEIA KKKRNEDTKI PRDFDYQQIS GLSNEVVAKL KDACPETIGK
610 620
ASRISGITPA AISLLLVYLK KHGLLRKLA
Length:629
Mass (Da):70,140
Last modified:September 13, 2005 - v1
Checksum:i9BEF2A394A696C27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000083 Genomic DNA. Translation: AAZ25703.1.
RefSeqiWP_011045765.1. NC_003910.7.

Genome annotation databases

EnsemblBacteriaiAAZ25703; AAZ25703; CPS_5047.
KEGGicps:CPS_5047.
PATRICi21472873. VBIColPsy94388_4608.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000083 Genomic DNA. Translation: AAZ25703.1.
RefSeqiWP_011045765.1. NC_003910.7.

3D structure databases

ProteinModelPortaliQ47U38.
SMRiQ47U38. Positions 1-552.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi167879.CPS_5047.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ25703; AAZ25703; CPS_5047.
KEGGicps:CPS_5047.
PATRICi21472873. VBIColPsy94388_4608.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiEOG6W9X6J.

Enzyme and pathway databases

BioCyciCPSY167879:GI48-5048-MONOMER.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 34H / ATCC BAA-681.

Entry informationi

Entry nameiMNMG_COLP3
AccessioniPrimary (citable) accession number: Q47U38
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2005
Last sequence update: September 13, 2005
Last modified: January 20, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.