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Q47TS0 (Q47TS0_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tfu_0106 EMBL AAZ54144.1
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP] EMBL AAZ54144.1
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida

Protein attributes

Sequence length670 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47TS0 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: EBADCE33D883426A

FASTA67074,098
        10         20         30         40         50         60 
MFDLAPIGVS ITRGPDHRLV YVNEAQRAIF GPRPLGKPLL QAFNDLAEAG YILVLDQVMT 

        70         80         90        100        110        120 
TGKPEFLPQV PVTVNYPNAG RQERYFNLSF TPVFLDDGEP AVLNLIADVT ETIDAAQRKR 

       130        140        150        160        170        180 
ALQRYTSIVR SGSLVEWSAS PIDGSLQWIR GWEEITGQPH EESRGHGWLN MVAPEDRAAL 

       190        200        210        220        230        240 
LASWLRAIDE VPDSVEYIFR VRTRDGTYRH FRAHAVPVRE NGVVVEWTGT CADVEQQWRE 

       250        260        270        280        290        300 
QRRHALFNRA SGAISNTALI EDMLKALPEV IVPEVADVCT VHLLSPTSSP ETSANPFIVE 

       310        320        330        340        350        360 
RLATKAREGI TVPPPRFQSR FTIRSTYLEL IRQKRSIHRV FPVGKPPLDP LSPNSSRWLR 

       370        380        390        400        410        420 
QVKANSVVML PITVEGELVA SLVAVVCGER EPLTQDDADL LADLIDHLQP TIDTFASFQR 

       430        440        450        460        470        480 
TQRVARALQH SLLSDPPTIP GLPIVGRYQT SPTSAEVGGD WYDAFIVDDT IMLVIGDVAG 

       490        500        510        520        530        540 
HDLTAATAMS QMRNMLRAFA ADHPHNPHEV LRRLDGAVQR SGEYKGTATC ILARVTPDSD 

       550        560        570        580        590        600 
GIWQVDYSVA GHLPPLLVLP NGETRFLEKA HDLLLGVDPT MPRHRALEVL PSGATLLLYT 

       610        620        630        640        650        660 
DGLVEHPHES LDIGLERLAH HCAAMARIPL NTFCDRLLTE LPIAGNDDIT LIALRLESPT 

       670 
LATASLARHG 

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References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ54144.1.
RefSeqYP_288167.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47TS0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269800.Tfu_0106.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ54144; AAZ54144; Tfu_0106.
GeneID3579686.
KEGGtfu:Tfu_0106.
PATRIC23900600. VBITheFus33945_0110.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000110138.
OMAEMEWANA.
OrthoDBEOG65TRQP.

Enzyme and pathway databases

BioCycTFUS269800:GI42-112-MONOMER.

Family and domain databases

Gene3D3.30.450.40. 1 hit.
InterProIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001610. PAC.
IPR000014. PAS.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 2 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47TS0_THEFY
AccessionPrimary (citable) accession number: Q47TS0
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: June 11, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)