Q47SZ3 (Q47SZ3_THEFY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribosomal RNA small subunit methyltransferase I HAMAP MF_01877
EC=2.1.1.198 HAMAP MF_01877

Alternative name(s):
16S rRNA 2'-O-ribose C1402 methyltransferase HAMAP MF_01877
rRNA (cytidine-2'-O-)-methyltransferase RsmI HAMAP MF_01877

Gene names

Name:	rsmI HAMAP MF_01877
Ordered Locus Names:	Tfu_0386

Organism

Thermobifida fusca (strain YX) [Complete proteome] [HAMAP]

Taxonomic identifier

269800 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptosporangineae › Nocardiopsaceae › Thermobifida

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA By similarity. HAMAP MF_01877
Catalytic activity	S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + 2'-O-methylcytosine(1402) in 16S rRNA. HAMAP MF_01877
Subcellular location	Cytoplasm By similarity HAMAP MF_01877.
Sequence similarities	Belongs to the methyltransferase superfamily. RsmI family. HAMAP MF_01877

Ontologies

Keywords
Biological process	rRNA processing HAMAP MF_01877
Cellular component	Cytoplasm HAMAP MF_01877
Ligand	S-adenosyl-L-methionine HAMAP MF_01877
Molecular function	Methyltransferase HAMAP MF_01877 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	enzyme-directed rRNA 2'-O-methylation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	rRNA (cytosine-2'-O-)-methyltransferase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q47SZ3 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 05B051CC35C769C6	FASTA	289	31,015
	10 20 30 40 50 60 MADQQSSTRP GTLTLAGLPI GHRDDTTPRL RAALENAEII AAEDTRRLRQ FAARIGVRPG 70 80 90 100 110 120 GKRGARIVSY YDANERERAA ELLADLQAGH DVLLVTDAGM PGVSDPGYRL ITACVDAGVP 130 140 150 160 170 180 MTVIPGPSAV TAALVLSGLP TDRFCFEGFP PRKGLAAYLA GLADERRTMV FFEAPHRLAA 190 200 210 220 230 240 TLTAMADAFG PDRPAAVCRE LTKTYEEVRR GGLAELAEWA AEHARGEITL VVRGAERTTP 250 260 270 280 QATPEALVAA VAAREDQGVP RKQAIQQVAQ EYGVPKREVY NAVHRTPSD

References

[1]

"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX." Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N. J. Bacteriol. 189:2477-2486(2007) [PubMed: 17209016] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000088 Genomic DNA. Translation: AAZ54424.1.
RefSeq	YP_288447.1. NC_007333.1.
3D structure databases
ProteinModelPortal	Q47SZ3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q47SZ3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3578870.
GenomeReviews	Gene locus Tfu_0386 in contig CP000088_GR.
KEGG	tfu:Tfu_0386.
NMPDR	fig|269800.4.peg.1239.
PATRIC	23901174. VBITheFus33945_0395.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0313.
HOGENOM	HBG529058.
OMA	IASDRFC.
PhylomeDB	Q47SZ3.
ProtClustDB	CLSK2768798.
Enzyme and pathway databases
BioCyc	TFUS269800:TFU_0386-MONOMER.
Family and domain databases
HAMAP	MF_01877. 16SrRNA_methyltr_I. [Tree]
InterPro	IPR000878. 4pyrrol_Mease. IPR014777. 4pyrrole_Mease_sub1. IPR014776. 4pyrrole_Mease_sub2. IPR008189. rRNA_ssu_MeTfrase_I. [Graphical view]
Gene3D	G3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit. G3DSA:3.30.950.10. 4pyrrole_Mease_sub2. 1 hit.
KO	K07056.
PANTHER	PTHR21091:SF18. PTHR21091:SF18. 1 hit.
Pfam	PF00590. TP_methylase. 1 hit. [Graphical view]
PIRSF	PIRSF005917. MTase_YraL. 1 hit.
SUPFAM	SSF53790. Cor/por_Metransf. 1 hit.
TIGRFAMs	TIGR00096. TIGR00096. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q47SZ3_THEFY

Accession

Primary (citable) accession number: Q47SZ3

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)